Abstracts for the 2021 SEA Symposium
This meeting has 204 associated abstracts.
| Student-Presented Abstracts, Consider For Talks | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Other | Alliance University (formerly Nyack College) | Jackie Washington washjd4@gmail.com |
Expanding the Diversity of Phages – A Novel Group of Tailless Phages | Mar 16, 2021 9:29 p.m. |
Summary Word Doc |
| Other | Arizona State University | Susanne Pfeifer spfeife1@asu.edu |
Complete genome sequence of Microbacterium bacteriophage Erla | Mar 16, 2021 11:07 a.m. |
Summary Word Doc |
| Other | Arizona State University | Susanne Pfeifer spfeife1@asu.edu |
Complete genome sequence of Mycobacterium bacteriophage Stinson | Mar 16, 2021 7:57 p.m. |
Summary Word Doc |
| Other | Austin Peay State University | Sergei Markov markovs@apsu.edu |
Isolation, characterization and genome annotation of bacteriophages from Clarksville, TN. | Mar 16, 2021 10:14 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Isolation and Analysis of Gordonia phage SummitAcademy | Mar 11, 2021 7:07 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Isolation and Basic Sequence Analysis of Gordonia rubripertincta Phage AJGECKO | Mar 11, 2021 7:15 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Characterizing Gordonia phage AJGECKO Through LIfecycle Analysis | Mar 11, 2021 7:24 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Investigating the Phage Genome Packaging Strategy of AJGECKO | Apr 8, 2021 7:07 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Mass spectrometry analysis of Gordonia phage AJGECKO | Mar 11, 2021 7:44 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Burst Size and Lifecycle Timing of Gordonia rubripertincta Bacteriophage SummitAcademy | Mar 12, 2021 3:34 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Don Breakwell breakwell@byu.edu |
Tail Assembly Chaperone Proteins of Microbacterium foliorum Cluster EE Phages | Mar 16, 2021 3:27 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Don Breakwell breakwell@byu.edu |
Saratos: A Newly Isolated and Novel Microbacterium foliorum Bacteriophage | Mar 16, 2021 3:29 p.m. |
Summary Word Doc |
| Other | College of Southern Nevada | Chelsey McKenna chelsey.mckenna@csn.edu |
Analysis of the novel bacteriophages Figliar and AnarQue | Mar 17, 2021 12:07 a.m. |
Summary Word Doc |
| Other | College of William & Mary | Margaret Saha mssaha@wm.edu |
Isolation and Characterization of Two (Semi-)Novel Mycobacteriophages, Calamitous and MadMen | Mar 16, 2021 6:54 p.m. |
Summary Word Doc |
| Other | Colorado State University-Pueblo | Amaya Garcia Costas amaya.garciacostas@csupueblo.edu |
Novel phage and novel cluster from Southern Colorado | Mar 16, 2021 7:07 p.m. |
Summary Word Doc |
| Other | Columbia State Community College | Elvira Eivazova eeivazova@columbiastate.edu |
Genome Analysis of the novel Cluster EC and EE Bacteriophages | Mar 16, 2021 11:59 p.m. |
Summary Word Doc |
| Other | Drexel University | Susan Gurney smrw@st-andrews.ac.uk |
Isolation and characterization of Microbacterium phages through a virtual lab experience | Mar 23, 2021 1:02 p.m. |
Summary Word Doc |
| Other | George Mason University | Anne Scherer aschere2@gmu.edu |
Annotation and Analysis of Two Gordonia Phage Genomes, TuertoX and ChisanaKitsune | Mar 17, 2021 8:21 p.m. |
Summary Word Doc |
| Other | Hope College | Joseph Stukey stukey@hope.edu |
Mycobacteriophage PenguinLover67: A New Member of Subcluster B9 | Mar 17, 2021 12:03 a.m. |
Summary Word Doc |
| Other | Howard Hughes Medical Institute | Danielle Heller hellerd@hhmi.org |
A genome-wide screen of the Cluster K phage Waterfoul reveals genes that inhibit the growth of Mycobacterium smegmatis | Mar 16, 2021 6:23 p.m. |
Summary Word Doc |
| Other | Kansas State University | Martha Smith-Caldas mscaldas@ksu.edu |
Potential Roles of Histidine Nucleotide Triad Binding Protein and Methyltransferase in Actinobacteriophages. | Mar 25, 2021 12:25 p.m. |
Summary Word Doc |
| Other | La Sierra University | Arturo Diaz adiaz@lasierra.edu |
Fifteen genes from bacteriophage Amelie are toxic when overexpressed in Mycobacterium smegmatis | Mar 15, 2021 7:53 p.m. |
Summary Word Doc |
| Other | La Sierra University | Arturo Diaz adiaz@lasierra.edu |
Annotation and Comparative Analysis of Two New Microbacterium foliorum Bacteriophages, Skylord and SBlackberry | Mar 15, 2021 8:37 p.m. |
Summary Word Doc |
| Other | Lehigh University | Vassie Ware vcw0@lehigh.edu |
Bioinformatics Discoveries: Investigating Mycobacteriophage Genomic Relationships and Immunity Mechanisms | Mar 16, 2021 10:37 a.m. |
Summary Word Doc |
| Other | Lehigh University | Vassie Ware vcw0@lehigh.edu |
Elucidating Mycobacteriophage Butters Gene Functions with the SEA-GENES Research Project at Lehigh | Mar 16, 2021 3:56 p.m. |
Summary Word Doc |
| Other | Lehigh University | Vassie Ware vcw0@lehigh.edu |
Cluster N Prophage-mediated Effects on Host Physiology | Mar 17, 2021 12:52 a.m. |
Summary Word Doc |
| Other | LeTourneau University | Greg Frederick GregFrederick@letu.edu |
Investigating a Major Facilitator Superfamily Transporter Gene and Genome Sequences Unique to Phages Nikao and Enkosi | Mar 19, 2021 9:38 a.m. |
Summary Word Doc |
| Other | LeTourneau University | Greg Frederick GregFrederick@letu.edu |
Comparative Analysis on Extreme Codon Usage Biases in tRNA Genes found in Actinobacteria Phages | Mar 18, 2021 6:29 p.m. |
Summary Word Doc |
| Other | Merrimack College | Janine LeBlanc-Straceski janine.leblancstraceski@merrimack.edu |
Argent26 and Quallification and the Typical Arrays of Reverse Small Protein Genes in Cluster E Phage | Mar 16, 2021 10:34 p.m. |
Summary Word Doc |
| Other | Merrimack College | Janine LeBlanc-Straceski janine.leblancstraceski@merrimack.edu |
Backyard Boys: Leozinho and Ghoulboy | Mar 16, 2021 10:41 p.m. |
Summary Word Doc |
| Other | Miami University | Mitchell Balish balishmf@miamioh.edu |
Writing Pages about Phages: A genomic analysis of novel bacteriophages of Microbacterium foliorum and Mycobacterium smegmatis | Apr 1, 2021 5:10 p.m. |
Summary Word Doc |
| Other | Monmouth College | James Godde jgodde@monm.edu |
Geovirology: Does geographic proximity correlate with genetic difference? | Mar 13, 2021 9:04 a.m. |
Summary Word Doc |
| Other | New York Institute of Technology | Leonidas Salichos lsalicho@nyit.edu |
Viral phylodynamics for three main phage clusters that infect the genus Arthrobacter in United States | Mar 16, 2021 7:09 p.m. |
Summary Word Doc |
| Other | Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Exploring a Transcriptional Regulatory Region in Mycobacteriophage JacoRen57 | Mar 13, 2021 4:48 p.m. |
Summary Word Doc |
| Other | Ouachita Baptist University | Nathan Reyna reynan@obu.edu |
Hacking the Iceman Genome with High School Students: | Mar 11, 2021 1:16 p.m. |
Summary Word Doc |
| Other | Providence College | Kathleen Cornely kcornely@providence.edu |
An Investigation of K2 Mycobacteriophage Lysin A Proteins | Mar 16, 2021 1 p.m. |
Summary Word Doc |
| Other | Purdue University | Kari Clase kclase@purdue.edu |
The Future of Food in Phage Structure | Mar 16, 2021 3:07 p.m. |
Summary Word Doc |
| Other | Queensborough Community College | Urszula Golebiewska ugolebiewska@qcc.cuny.edu |
Analysis of the genome of BelmontSKP | Mar 16, 2021 12:29 p.m. |
Summary Word Doc |
| Other | Queensborough Community College | Urszula Golebiewska ugolebiewska@qcc.cuny.edu |
Observations and Annotations on the Phage Neptune | Mar 16, 2021 12:59 p.m. |
Summary Word Doc |
| Other | SUNY Old Westbury | Christos Noutsos noutsosc@oldwestbury.edu |
Selective pressure in a region of Raythefirefly a DB cluster gemone | Mar 15, 2021 1:06 p.m. |
Summary Word Doc |
| Other | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Modulation of Bacterial Host Phenotypes by Mycobacteriophage Pixie Gene Products | Mar 20, 2021 1:21 a.m. |
Summary Word Doc |
| Other | The Ohio State University | Sarah Ball ball.1766@osu.edu |
Annotation and Analysis of Two Cluster AU1 Phage, CastorTray and DevitoJr | Mar 16, 2021 11:27 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Utilizing Comparative Genomic Analysis to Define Superclusters as a Method for Understanding Intercluster Phage Diversity Across Different Host Types | Mar 16, 2021 9:19 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Comparative Genomic Analysis of Cluster H Mycobacteriophages Reveals Conserved Motif and Intra-cluster Variation | Mar 16, 2021 9:32 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Novel application of dimensionality reduction and marker analysis enables comprehensive analysis of Mycobacteriophage diversity | Mar 17, 2021 12:42 a.m. |
Summary Word Doc |
| Other | University of Colorado Boulder | Christy Fillman christy.fillman@Colorado.EDU |
Characterizing Genetic Elements in the Cluster O Mycobacteriophage Blessica | Mar 17, 2021 3:33 p.m. |
Summary Word Doc |
| Other | University of Colorado Boulder | Nancy Guild nancy.guild@colorado.edu |
An Entomopathogenic Bacteria-Like Insecticidal Toxin With ADP-Ribosyltransferase Activity Characterized In A2 Mycobacteriophage BengiVuitton | Mar 17, 2021 5:09 p.m. |
Summary Word Doc |
| Other | University of Colorado Boulder | Christy Fillman christy.fillman@Colorado.EDU |
Gene Function Similarities and Genome Synteny Suggest Evolutionary Relationships Between Bacteriophages | Mar 17, 2021 6:08 p.m. |
Summary Word Doc |
| Other | University of Connecticut | Johann Gogarten gogarten@uconn.edu |
The Intein in the Terminase of Actinobacteriophage Zooman (Cluster GD) | Mar 17, 2021 1:39 p.m. |
Summary Word Doc |
| Other | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Computational Analysis of Gordonia Bacteriophage Phishy Genome Sequence | Mar 10, 2021 12:56 p.m. |
Summary Word Doc |
| Other | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Complete Genome Sequence Annotation of Microbacterium Bacteriophage Dothraki | Apr 6, 2021 2:21 p.m. |
Summary Word Doc |
| Other | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Impact of the SEA-PHAGES program on the Ibadan Bacteriophage Research Team | Mar 11, 2021 5:23 a.m. |
Summary Word Doc |
| Other | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
Characterization of prophiG122-2 from clinical Mycobacterium abscessus strain G122: a novel cluster A1 prophage | Mar 15, 2021 7:41 p.m. |
Summary Word Doc |
| Other | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
Mycobacterium abscessus ProphageG72-1: no polymoprhic toxin but still in with the cluster MabD kin | Mar 16, 2021 3:52 p.m. |
Summary Word Doc |
| Other | University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
Mab Cluster C prophages prophiA315 and prophiG190 provide Mycobacterium abscessus clinical isolates with Esx-like toxin systems. | Mar 16, 2021 12:53 p.m. |
Summary Word Doc |
| Other | University of Maryland, Baltimore County | Steve Caruso scaruso@umbc.edu |
There’s no such thing as overpacking: do phages compensate for GC content mismatch by bringing their own tRNAs? | Mar 16, 2021 3:40 p.m. |
Summary Word Doc |
| Other | University of North Texas | Lee Hughes lhughes@unt.edu |
Isolation and Preliminary Annotation of 5 Streptomyces griseus and 1 Streptomyces sanglieri Bacteriophages | Mar 16, 2021 4:28 p.m. |
Summary Word Doc |
| Other | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Investigation of the Translational Frameshift within EA Bacteriophage Tail Assembly Chaperones | Mar 16, 2021 11:11 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Annotation of VanLee, a Unique Singleton Actinobacteriophage that Infects Multiple Gordonia Strains | Mar 15, 2021 3:09 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Identification of a novel cytotoxic protein in Mycobacterium phage Girr | Mar 16, 2021 2:03 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Bioinformatic Analysis of the Major Capsid Protein from Bacteriophages between Clusters | Mar 16, 2021 6:57 p.m. |
Summary Word Doc |
| Other | University of the Sciences (now St. Joseph's Univ) | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
Beeming Across the World of Phages | Mar 12, 2021 3:20 p.m. |
Summary Word Doc |
| Other | University of the Sciences (now St. Joseph's Univ) | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
Shine a Light on Beem Annotation | Mar 12, 2021 3:24 p.m. |
Summary Word Doc |
| Other | University of the Sciences (now St. Joseph's Univ) | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
Investigating the Presence of Promoters and Terminators in Phage Beem | Mar 12, 2021 3:29 p.m. |
Summary Word Doc |
| Other | University of the Sciences (now St. Joseph's Univ) | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
Annotation of E Cluster Phage Filch, and its Comparison to TB-infecting Singleton Phages | Mar 12, 2021 3:33 p.m. |
Summary Word Doc |
| Other | University of the Sciences (now St. Joseph's Univ) | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
Shining a Beem of Light on Phages | Mar 12, 2021 3:42 p.m. |
Summary Word Doc |
| Other | University of the Sciences (now St. Joseph's Univ) | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
Who’s Bigger than Rasputia? | Mar 12, 2021 4 p.m. |
Summary Word Doc |
| Other | Western Kentucky University | Claire Rinehart claire.rinehart@wku.edu |
Five Mycobacterium Phages: Sunshine924 (A1), PetiteSangsue (A4), Sparxx (A4), Cookiedough (A6), Peacemeal1 (A10). | Mar 17, 2021 12:06 a.m. |
Summary Word Doc |
| Other | Western Kentucky University | Claire Rinehart claire.rinehart@wku.edu |
Four Mycobacterium Phages: Leviathan (A2), Miculucigas (A2), Thresher (E), and Wiggen (E). | Mar 17, 2021 12:28 a.m. |
Summary Word Doc |
| Other | Winthrop University | Victoria Frost frostv@winthrop.edu |
Characterizing the Function of Bacteriophage Cain Genes in Host Mycobacterium smegmatis | Mar 16, 2021 1:16 p.m. |
Summary Word Doc |
| Student-Presented Abstracts, DO NOT Consider For Talks | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Other | Allegany College of Maryland | Steven Heninger sheninger@allegany.edu |
Uniquely Similar: A Summary of Strathdee | Mar 17, 2021 9:12 p.m. |
Summary Word Doc |
| Other | Benedictine University | Tiara Perez Morales tperezmorales@ben.edu |
Twitch mycobacteriophage genome annotation by BIOL1195 undergraduate students | Mar 16, 2021 3:40 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Don Breakwell breakwell@byu.edu |
The Genome of Microbacterium foliorum phage Mandalorian | Mar 16, 2021 3:10 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Don Breakwell breakwell@byu.edu |
Comparative Genomic Analysis of M. foliorum Cluster EE Phages | Mar 16, 2021 3:18 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Don Breakwell breakwell@byu.edu |
Characterization of novel Microbacterium foliorum bacteriophage Bri160 | Mar 16, 2021 3:22 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Don Breakwell breakwell@byu.edu |
A Comparative Analysis of Microbacterium foliorum Phage Subclusters EA5 Through EA11 | Mar 16, 2021 3:42 p.m. |
Summary Word Doc |
| Other | Brigham Young University | Don Breakwell breakwell@byu.edu |
The Remarkably Homogenous EA2 Subcluster of Microbacterium foliorum Phages | Mar 16, 2021 3:43 p.m. |
Summary Word Doc |
| Other | Calvin University | John Wertz jwertz59@calvin.edu |
Isolation and analysis of Gordonia phages Phabuloso and APunk | Mar 16, 2021 5:56 p.m. |
Summary Word Doc |
| Other | Carthage College | Deb Tobiason dtobiason@carthage.edu |
Hybrid Hunting for Phages: Discovery and Isolation of Six Mycobacteriophages | Mar 16, 2021 11:05 a.m. |
Summary Word Doc |
| Other | Coastal Carolina University | Daniel Williams dwilliams@coastal.edu |
Uncovering Gene Functions of the Mycobacteriophage Phayonce | Mar 16, 2021 2:44 p.m. |
Summary Word Doc |
| Other | College of Charleston | Christine Byrum byrumc@cofc.edu |
Genome Sequences of the F1 Subcluster Mycobacteriophages Awesomesauce and LastJedi | Apr 2, 2021 1:58 a.m. |
Summary Word Doc |
| Other | College of Charleston | Christine Byrum byrumc@cofc.edu |
Annotation of the Q Cluster Mycobacteriophage Luna22 Genome | Mar 16, 2021 1:29 a.m. |
Summary Word Doc |
| Other | College of Charleston | Christine Byrum byrumc@cofc.edu |
Genome Annotation of Subcluster L2 Mycobacteriophage Netyap | Mar 16, 2021 1:46 a.m. |
Summary Word Doc |
| Other | College of St. Scholastica | Daniel Westholm dwesthol@css.edu |
Elucidation of Gene Function in Cluster P Mycobacteriophage Brusacoram | Mar 16, 2021 11:41 a.m. |
Summary Word Doc |
| Other | College of St. Scholastica | Daniel Westholm dwesthol@css.edu |
Comparative Genomics of a 2000 bp Insert in A6 Mycobacteriophages | Mar 16, 2021 1:14 p.m. |
Summary Word Doc |
| Other | College of St. Scholastica | Daniel Westholm dwesthol@css.edu |
Minor Tail Protein Differences in Cluster A3 Mycobacteriophages May Contribute to Expanded Host Range | Mar 16, 2021 1:48 p.m. |
Summary Word Doc |
| Other | Collin College | Bridgette Kirkpatrick bkirkpatrick@collin.edu |
Annotation of the M. foliorum specific EA1 Bacteriophage SJay | Mar 16, 2021 3:49 p.m. |
Summary Word Doc |
| Other | Culver-Stockton College | Esa Seegulam mseegulam@culver.edu |
Isolation and Characterization of Mycobacteriophage DrSeegs | Mar 18, 2021 10:50 a.m. |
Summary Word Doc |
| Other | Doane University | Erin Doyle erin.doyle@doane.edu |
GENOME ANNOTATION OF GORDONIA PHAGE NORVS IN THE CQ SUBCLUSTER | Mar 16, 2021 2:51 p.m. |
Summary Word Doc |
| Other | Durham Technical Community College | Marie Fogarty fogartym@durhamtech.edu |
Tracking Down Tracker and Sephiroth: Using DOGEMS to Identify Gordonia terrae Bacteriophages | Mar 17, 2021 8:12 a.m. |
Summary Word Doc |
| Other | Fayetteville State University | Kristen Delaney-Nguyen kdelaney@uncfsu.edu |
Annotation of Microbacterium Phage MrWorldwide, a Member of the EA1 Subcluster | Mar 15, 2021 12:13 p.m. |
Summary Word Doc |
| Other | Gonzaga University | Joey Haydock haydock@gonzaga.edu |
Three new Microbacterium foliorum EE cluster phages, Octopus, BoomRoasted, and Aztec | Mar 16, 2021 6:13 p.m. |
Summary Word Doc |
| Other | Gonzaga University | Ann-Scott Ettinger ettingera@gonzaga.edu |
Five New EG Cluster Phages: Phabia, Rudy, Namago, Jehoshaphat, and Blab | Mar 17, 2021 midnight |
Summary Word Doc |
| Other | Gonzaga University | Ann-Scott Ettinger ettingera@gonzaga.edu |
Mycobacteriophage SoSeph: Which K5 Cluster phages are the closest relatives? | Mar 16, 2021 11:50 p.m. |
Summary Word Doc |
| Other | Gonzaga University | William Ettinger ettinger@gonzaga.edu |
EK1 microbacteriophages CrunchyBoi and PineapplePluto | Mar 17, 2021 1:18 a.m. |
Summary Word Doc |
| Other | Howard University | Mary A Ayuk mary.ayuk@howard.edu |
Analysis of Diverse Temperate Phages | Mar 15, 2022 10:07 a.m. |
Summary Word Doc |
| Other | Howard University | Courtney Robinson courtney.robinson@howard.edu |
Annotation of Cluster B Phages Freya, True and Lars | Mar 29, 2021 9:38 a.m. |
Summary Word Doc |
| Other | Illinois Wesleyan University | Dave Bollivar dbolliva@iu.edu |
Illinois Wesleyan’s Welcome Phage Annotation | Mar 25, 2021 10:58 a.m. |
Summary Word Doc |
| Other | Illinois Wesleyan University | Dave Bollivar dbolliva@iu.edu |
Pickles13: A Dill-Lightful Bacteriophage Discovery | Mar 25, 2021 11:02 a.m. |
Summary Word Doc |
| Other | Iowa State University | Nick Peters ntpeters@iastate.edu |
In-Person Phage Discovery During a Pandemic | Mar 16, 2021 11:05 a.m. |
Summary Word Doc |
| Other | Iowa State University | Nick Peters ntpeters@iastate.edu |
Carrying the Torch: revising annotations started, but never finished | Mar 17, 2021 1:13 p.m. |
Summary Word Doc |
| Other | James Madison University | Steven Cresawn cresawsg@jmu.edu |
Genomic characterization of Mycobacteriophages HarveySr and Gravaillia | Mar 16, 2021 3:56 p.m. |
Summary Word Doc |
| Other | James Madison University | Louise Temple templelm@jmu.edu |
The Bobb family grows up | Mar 23, 2021 12:43 p.m. |
Summary Word Doc |
| Other | Montclair State University | Kirsten Monsen-Collar monsenk@mail.montclair.edu |
Tomlarah, Jemmno, and Sham4: Three Novel Mycobacterium phage | Mar 16, 2021 6:51 p.m. |
Summary Word Doc |
| Other | Neumann University | Matthew Mastropaolo mastropm@neumann.edu |
A Comparison of Southeastern Pennsylvania Microbacterium Phage Using DNA Sequencing, Gel Electrophoresis, and Host Range experiments | Mar 16, 2021 11:22 a.m. |
Summary Word Doc |
| Other | New York Institute of Technology | Bryan Gibb bgibb@nyit.edu |
Investigation of lytic behavior of phage Eraser from a cluster of temperate phages. | Mar 16, 2021 11:28 p.m. |
Summary Word Doc |
| Other | Northern State University | Jon Mitchell jon.mitchell@northern.edu |
Bacteriophage Isolation against Actinomycete Gordonia rubripertincta and Bioinformatic Characterization of the Bacteriophages Sopespian and PsychoKiller. | Mar 16, 2021 5:35 p.m. |
Summary Word Doc |
| Other | Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Genetic Annotation of Bacteriophages MScarn, Knocker, and Neos5 | Mar 15, 2021 12:03 p.m. |
Summary Word Doc |
| Other | Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Stormbreaker8 and A3Wally Bacteriophage Genome Annotations | Mar 13, 2021 3:41 p.m. |
Summary Word Doc |
| Other | Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Investigating Gene Functions in Mycobacteriophage Island3 | Mar 13, 2021 4:19 p.m. |
Summary Word Doc |
| Other | Purdue University | Kari Clase kclase@purdue.edu |
Investigation of C1 cluster mycobacteriophage Izajani | Mar 15, 2021 4:35 p.m. |
Summary Word Doc |
| Other | Purdue University | Kari Clase kclase@purdue.edu |
Comparative Analysis of Predictive 3D Atomic Modelling Programs with Mycobacteriophage Delylah Proteins | Mar 15, 2021 4:53 p.m. |
Summary Word Doc |
| Other | Purdue University | Kari Clase kclase@purdue.edu |
Understanding similarities and differences between membrane proteins in mycobacteriophage Izajani | Mar 15, 2021 6:42 p.m. |
Summary Word Doc |
| Other | Purdue University | Kari Clase kclase@purdue.edu |
Using unconventional programs to aid in the annotation of the mycobacteriophage ScoobyDoobyDoo annotation | Mar 16, 2021 5:04 p.m. |
Summary Word Doc |
| Other | Purdue University | Kari Clase kclase@purdue.edu |
Visualizing Bacteriophage Evolution through Sequence and Structural Phylogeny of Lysin and Terminase Proteins | Mar 16, 2021 6:32 p.m. |
Summary Word Doc |
| Other | Purdue University | Kari Clase kclase@purdue.edu |
A Machine Learning Approach to Bacteriophage Function Call Annotation | Mar 18, 2021 12:15 a.m. |
Summary Word Doc |
| Other | Salem State University | Amy Sprenkle asprenkle@salemstate.edu |
Discovery and Annotation of Microbacterium foliorum phage Juicer and Gordonia rubripertincta phage GiKK. | Mar 13, 2021 5:34 p.m. |
Summary Word Doc |
| Other | Salish Kootenai College | Ranalda Tsosie ranalda_tsosie@skc.edu |
The Learning Curves of Bacteriophage Hunting | Mar 30, 2021 4:17 p.m. |
Summary Word Doc |
| Other | Southern Connecticut State University | Nicholas Edgington EdgingtonN1@SouthernCT.edu |
All in 'Z' family: Annotation and analysis of two new Cluster AZ members from SCSU | Mar 22, 2021 9:18 p.m. |
Summary Word Doc |
| Other | Southern Maine Community College | Brian Tarbox btarbox@smccme.edu |
Amphibious Phage | Mar 15, 2021 8:47 a.m. |
Summary Word Doc |
| Other | State University of New York-Plattsburgh | Alyssa Gleichsner aglei002@plattsburgh.edu |
The discovery and annotation of bacteriophage Lola20 | Apr 1, 2021 2:54 p.m. |
Summary Word Doc |
| Other | SUNY Old Westbury | Jillian Nissen nissenj@oldwestbury.edu |
Annotating Akhila’s genome, a first encounter with Bioinformatics. | Mar 11, 2021 1:06 p.m. |
Summary Word Doc |
| Other | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Isolation of Duplicate Cluster EE Bacteriophage PurpleGoat | Mar 16, 2021 6:06 p.m. |
Summary Word Doc |
| Other | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Isolation and Annotation of Cluster EB Bacteriophage IndyLu | Mar 16, 2021 6:07 p.m. |
Summary Word Doc |
| Other | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Bacteriophage Jewell, Isolated from a Microbacterium foliorum Culture | Mar 16, 2021 5:08 p.m. |
Summary Word Doc |
| Other | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Bacteriophage Tank18, Isolated from a Microbacterium foliorum Culture | Mar 17, 2021 5:05 p.m. |
Summary Word Doc |
| Other | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Amplification and Cloning of Mycobacteriophage Pixie Genes | Mar 16, 2021 5:38 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Comparative analyses of dissimilarity in Cluster A phages highlighting the non-uniform continuum of diversity | Mar 16, 2021 9:03 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Singleton Phage Dori Reveals Complex Relationships with Singleton and Clustered Phages | Mar 16, 2021 9:09 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Characterization of Genome Mosaicism in Cluster E Mycobacteriophages | Mar 16, 2021 9:11 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Comparative Genomic Analysis Between Mycobacterium Singletons and Clustered Mycobacteriophages | Mar 16, 2021 9:14 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Comparative Genomic Analysis of Mycobacteriophage Cluster W to other Mycobacteriophage Clusters | Mar 16, 2021 9:16 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Cluster H: Inter and Intra-cluster Relationships | Mar 16, 2021 9:21 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Non-Conserved Regions in the Cluster E Phages Genome Reveal Relationship with Cluster J | Mar 16, 2021 9:24 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Genomic Comparison Reveals Similarities between Low GC% Mycobacteriophages Infecting M.smegmatis | Mar 16, 2021 9:27 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Jordan Parker jordan.p.parker@kp.org |
Conservation of the Lysis Cassette in Mycobacterium and Gordonia Phages | Mar 16, 2021 9:29 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Exploring Genomic Conservation in Actinobacteriophages with Small Genomes | Mar 16, 2021 11:54 p.m. |
Summary Word Doc |
| Other | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Prolate Phages From Specific Hosts Show Conservation of the Major Capsid Protein Gene | Mar 17, 2021 12:12 a.m. |
Summary Word Doc |
| Other | University of Central Oklahoma | Hari Kotturi hkotturi@uco.edu |
The Isolation and Characterization of a Temperate Phage Cogvinedu using Arthrobacter sp. KY3901 | Mar 16, 2021 8:55 a.m. |
Summary Word Doc |
| Other | University of Connecticut | Johann Gogarten gogarten@uconn.edu |
Codon Usage in Actinobacteriophage Zooman (Cluster GD) Versus its Host Microbacterium foliorum | Mar 17, 2021 1:39 p.m. |
Summary Word Doc |
| Other | University of Evansville | Joyce Stamm joycestamm@twc.com |
Identifying the tail assembly chaperone programmed translational frameshift in BK cluster phages | Mar 25, 2021 1:54 p.m. |
Summary Word Doc |
| Other | University of Hawaii at Manoa | Megan Porter mlporter@hawaii.edu |
Complete genome sequences and syntenic comparisons of bacteriophages from Hawai'i (EastWest, KeAli'i) | Mar 22, 2021 10:46 p.m. |
Summary Word Doc |
| Other | University of Houston-Downtown | Sanghamitra Saha sahas@uhd.edu |
Isolation and annotation of Xitlalli, a cluster EK phage | Mar 25, 2021 6:19 p.m. |
Summary Word Doc |
| Other | University of Louisiana at Monroe | Ann Findley afindley@ulm.edu |
Annotation and Comparative Analysis of Gordonia phage Baddon (Cluster DE1) | Mar 16, 2021 8:18 a.m. |
Summary Word Doc |
| Other | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
An APB on Mab Cluster C prophages prophiG73-1 and prophiA353-2: Armed and dangerous | Mar 16, 2021 3:53 p.m. |
Summary Word Doc |
| Other | University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
Genomic Analysis of Novel Bacteriophage ProphiA311-1 | Mar 16, 2021 12:42 p.m. |
Summary Word Doc |
| Other | University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
An analysis of Mycobacteriophage prophiA353-3 | Mar 16, 2021 12:45 p.m. |
Summary Word Doc |
| Other | University of Mary Washington | Swati Agrawal sagrawal@umw.edu |
Phage Hunting at the University of Mary Washington | Apr 2, 2021 11:35 p.m. |
Summary Word Doc |
| Other | University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
FrankAM and TatarkaPM: identical EA1 Microbacteriophages | Mar 16, 2021 5:33 p.m. |
Summary Word Doc |
| Other | University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
All Hail Bacteriophages! The Genomic Annotation of the Mycobacteriophage Hail | Mar 16, 2021 5:37 p.m. |
Summary Word Doc |
| Other | University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
Discovery and gene annotation of Microbacterium foliorum phage Concrete | Mar 16, 2021 6:23 p.m. |
Summary Word Doc |
| Other | University of Nebraska-Lincoln | Catherine Chia cchia1@unl.edu |
Isolation of phage that infect Gordonia rubripertincta and annotation of Nithya and Vine | Mar 16, 2021 1:02 p.m. |
Summary Word Doc |
| Other | University of Nevada Las Vegas | Philippos Tsourkas philippos.tsourkas@unlv.edu |
Genome sequence of cluster A6 phage Hoot and cluster G1 phage Jolene, from Las Vegas, Nevada | Mar 16, 2021 10:05 p.m. |
Summary Word Doc |
| Other | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Characterization of the Beautiful Bacteriophage Zeina | Mar 16, 2021 11:10 p.m. |
Summary Word Doc |
| Other | University of Ottawa | Adam Rudner arudner@uottawa.ca |
THE DEEP SECRETS OF EK2 CLUSTER BACTERIOPHAGE YAFA | Mar 16, 2021 4:19 p.m. |
Summary Word Doc |
| Other | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Every Path Has a Muddy Puddle: Classification and Analysis of a New FE Bacteriophage | Mar 16, 2021 11:12 p.m. |
Summary Word Doc |
| Other | University of Ottawa | Adam Rudner arudner@uottawa.ca |
A Canadian Cluster of AZ Bacteriophages | Mar 16, 2021 11:13 p.m. |
Summary Word Doc |
| Other | University of Pittsburgh | Kristen Butela kab340@pitt.edu |
The genetic diversity of Gordonia phages may offer insights into the mechanisms that control viral host range | Mar 16, 2021 3:07 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
An Analysis of Possible Cytotoxicity and Defense Characteristics of Mycobacterium Phage Girr Gene 40 | Mar 15, 2021 4:01 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Phenotypic Analysis of Gene 43 Function in Mycobacteriophage Girr | Mar 16, 2021 1:25 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Analysis of Bacteriophage Girr Hypothetical Gene 67 using Phenotypic Assays | Mar 16, 2021 1:29 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Research and investigation into the function and characteristics of Girr Gene 49 | Mar 16, 2021 1:33 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Analysis of Gene 78 of the Bacteriophage Girr Genome | Mar 16, 2021 1:36 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Functional Analysis of Gene 89 in Mycobacterium phage Girr through Cytotoxicity and Immunity Assays | Mar 16, 2021 1:38 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Toxicity Analysis of Mycobacterium Phage Girr’s Gene 29 | Mar 16, 2021 1:48 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Analysis of bacteriophage Girr gene 86 properties | Mar 16, 2021 1:51 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
The Analysis of GIRR gp42 in Several Phenotypic Assays | Mar 16, 2021 2:27 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Analysis of cytotoxicity and defense functions of bacteriophage Girr’s gene 83 in host Mycobacterium smegmatis | Mar 16, 2021 2:29 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
The Cloning and Evaluation of Mycobacterium Phage Girr Gene 28 | Mar 16, 2021 3:29 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Gene 7 of Mycobacterium Girr Analysis for Cytotoxicity and Immunity | Mar 16, 2021 3:31 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Determining the Function of Gene 77 in Mycobacterium Phage Girr | Mar 16, 2021 3:34 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Research and Analysis of the Function of Gene 30 in Mycobacterium Phage Girr | Mar 16, 2021 3:38 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Annotation of the DE3 Cluster Gordonia Phage EdmundFerry | Mar 16, 2021 9:03 p.m. |
Summary Word Doc |
| Other | University of Southern California | Christa Bancroft cbancrof@usc.edu |
Finding Fun in Fefferhead and Polishing Up the Genome of ShamWow | Mar 11, 2021 1:55 p.m. |
Summary Word Doc |
| Other | University of the Sciences (now St. Joseph's Univ) | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
Analysis of unknown gene functions in the bacteriophage NormanBulbieJr | Mar 16, 2021 3:21 p.m. |
Summary Word Doc |
| Other | University of Wisconsin-River Falls | Karen Klyczek karen.k.klyczek@uwrf.edu |
Introducing Footloose, a new singleton phage with an intriguing origin story | Mar 17, 2021 2:26 a.m. |
Summary Word Doc |
| Other | Virginia Commonwealth University | Allison Johnson aajohnson@vcu.edu |
Hunting for Phage Darren During a Pandemic | Mar 16, 2021 10:22 a.m. |
Summary Word Doc |
| Other | Virginia Commonwealth University | Allison Johnson aajohnson@vcu.edu |
Genome Annotation of Bacillus Phage Darren | Mar 16, 2021 10:06 a.m. |
Summary Word Doc |
| Other | Virginia Commonwealth University | Allison Johnson aajohnson@vcu.edu |
Comparative Genomics of Darren, BillyBob and MrBubbles | Mar 16, 2021 10:19 a.m. |
Summary Word Doc |
| Other | Virginia State University | Andrea Beyer abeyer@rbc.edu |
Sarge in Charge: A genomic annotation and analysis of FB Arthrobacteriophage Sarge | Mar 16, 2021 5:30 p.m. |
Summary Word Doc |
| Other | Virginia Tech | Stephanie Voshell svoshell@vt.edu |
GoldenSpark: A temperate phage with a troublesome genome | Mar 16, 2021 12:20 p.m. |
Summary Word Doc |
| Other | Virginia Tech | Stephanie Voshell svoshell@vt.edu |
Seeing double: A case study of gene duplication in Mycobacteriophage GoldenSpark | Mar 16, 2021 12:26 p.m. |
Summary Word Doc |
| Other | Virginia Tech | Stephanie Voshell svoshell@vt.edu |
Mycobacteriophage Duplicity: A temperate N cluster phage | Mar 16, 2021 11:07 a.m. |
Summary Word Doc |
| Other | Western Carolina University | Maria Gainey mdgainey@email.wcu.edu |
The Sequencing and Annotation of Two “Vintage” Actinobacteriophages Culver and StolenFromERC Discovered at Western Carolina University | Mar 16, 2021 10:28 p.m. |
Summary Word Doc |
| Other | Winthrop University | Kristi Westover westoverk@winthrop.edu |
Isolating, Purifying, and Characterizing Mycobacterium Bacteriophages Collected from Soil on the Winthrop University Campus | Mar 16, 2021 10:33 a.m. |
Summary Word Doc |
| Other | Winthrop University | Kristi Westover westoverk@winthrop.edu |
Genome Annotation of Bacteriophages Allegro and Moostard | Mar 16, 2021 10:45 a.m. |
Summary Word Doc |
| Other | Worcester Polytechnic Institute | JoAnn Whitefleet-Smith jaws@wpi.edu |
Exploring the Relationship Between Environment and GC Content in Bacteriophages | Mar 16, 2021 2:30 p.m. |
Summary Word Doc |
| Other | Worcester Polytechnic Institute | JoAnn Whitefleet-Smith jaws@wpi.edu |
Genes of Unknown Function | Mar 16, 2021 2:38 p.m. |
Summary Word Doc |
| Faculty-Presented Abstracts | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Other | Drexel University | Brett Condon bmc327@drexel.edu |
Efforts to deliver authentic lab experiences to students in a virtual lab: adapting SEA-PHAGES to Zoom | Mar 17, 2021 2:07 p.m. |
Summary Word Doc |
| Other | University of Connecticut | Johann Gogarten gogarten@uconn.edu |
Inteins in the Terminase of Actinophages – Parasites all the Way Down? | Mar 15, 2021 7:25 p.m. |
Summary Word Doc |
| Other | University of Nevada Las Vegas | Philippos Tsourkas philippos.tsourkas@unlv.edu |
Phage Commander, an app for rapid gene identification in bacteriophage genomes using multiple programs | Mar 16, 2021 7:05 p.m. |
Summary Word Doc |
| Other | University of Pittsburgh | Kristen Butela kab340@pitt.edu |
A Hybrid Approach to Teaching the SEA-PHAGES Phage Discovery Lab Course | Mar 12, 2021 10:33 a.m. |
Summary Word Doc |
| Other | University of Pittsburgh | Beckie Bortz rlb6@pitt.edu |
Teaching Gene Prediction Programs | May 17, 2021 6:38 p.m. |
Summary Word Doc |
| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
A Quick Proteomic Analysis Using SDS-PAGE that can be added to the SEA PHAGES Course to Assess a "Phage Protein Profile” | Mar 16, 2021 6:55 p.m. |
Summary Word Doc |
| Other | University of West Florida | Kari Clifton kclifton@uwf.edu |
MrGreen, in the lab, with a pipette | Mar 16, 2021 3:55 p.m. |
Summary Word Doc |
| Other | Western Carolina University | Jamie Wallen jamiewallen@email.wcu.edu |
Crystal Structure of a Cluster A2 Immunity Repressor Bound to DNA Sheds New Light on Transcriptional Silencing | Mar 15, 2021 4:37 p.m. |
Summary Word Doc |
| Other | Western Carolina University | Maria Gainey mdgainey@email.wcu.edu |
The Search for a Novel Repressor Gene in Cluster M Bacteriophages | Mar 16, 2021 9:40 p.m. |
Summary Word Doc |
| Other | Western Kentucky University | Rodney King rodney.king@wku.edu |
The first SEA-GENES experience at Western Kentucky University | Mar 16, 2021 12:01 p.m. |
Summary Word Doc |
| TA-Presented Abstracts | ||||
|---|---|---|---|---|
| Institution | Faculty Contact | Title | Last Modified | Files |
| Other | Vassie Ware vcw0@lehigh.edu |
Drivers of Recombination between Phage Genomes: Mycobacteriophage Butters prophage-mediated constraints on Island3 infection of Mycobacterium smegmatis | Mar 16, 2021 11 p.m. |
Summary Word Doc |
| Other | Kari Clase kclase@purdue.edu |
New Methods of Phage Protein Study: From Statistical Analysis to Simulations | Mar 15, 2021 12:54 p.m. |
Summary Word Doc |
| Other | Lauren Novak novak34@purdue.edu |
Purdue University SEA-PHAGES Course Structure and Adaptation During Covid-19 | Mar 15, 2021 5:03 p.m. |
Summary Word Doc |
| Other | Kari Clase kclase@purdue.edu |
Proteomic and Lipidomic Analysis of Mycobacteriophage FrenchFry Mass Spectrometry Data | Mar 16, 2021 4:29 p.m. |
Summary Word Doc |
| Other | Julia Lee-Soety jlee04@sju.edu |
Mycobacteriophages in the B1 cluster discovered at and around Saint Joseph’s University. | Mar 21, 2021 9:26 p.m. |
Summary Word Doc |
| Other | Ann Findley afindley@ulm.edu |
Annotation and Comparative Analysis of Two Cluster DJ Phages Isolated From Different Gordonia Host Species | Mar 16, 2021 10:39 a.m. |
Summary Word Doc |