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The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

SEA-PHAGES Publications

Below is a list of publications that are based on data generated by participants in the SEA-PHAGES program and are authored by SEA-PHAGES students or faculty.

Showing ONLY genome announcements. Use the links above the table to change this.

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Title

Undergrad Authors

Lee, Puglisi, et alMartin Lee, Kayla M. Puglisi, UMBC STEM-BUILD Cohort 1, Ivan Erill, Steven M. Caruso 2018 Genome Announcements Complete Genome Sequences of HonestAbe, Anthony, and Taffo16, Three Cluster C Bacillus cereus Group Bacteriophages Yes
Christopher James Pattona, Hari Kotturia Christopher James Pattona, Hari Kotturia 2018 Genome Announcements Genomic Sequence of Mycobacteriophage OKCentral2016 Yes
Doyle et al.Doyle EL, Fillman CL, Reyna NS, Tobiason DM, Westholm DE, Askins JL, Backus BP, Baker AC, Ballard HS, Bisesi PJ, Bond L, Byrnes D, Carlstedt H, Dodson KS, Fallert MJ, Foster KJ, Games DN, Grams TR, Guild NA, Hurd A, Iwata N, Kepler CR, Krenzke LR, Luekens K, Lewis J, McEntee C, McGee JC, Nalley N3, Plymale RC, Prochaska J, Rogers RG, Schipper JB, Snyder K, Uhrich K, Vermillion CD, Vickers SK, Wenta MD, Yates TZ, Young CF, Stoner TH, Pope WH, Jacobs-Sera D, Garlena RA, Russell DA, Cresawn SG, Hatfull GF. 2018 Genome Announcements Genome Sequences of Four Cluster P Mycobacteriophages 33
Erill, Caruso, et alIvan Erill, Steven M. Caruso, on behalf of the 2016 UMBC Phage Hunters 2018 Genome Announcements Complete Genome Sequence of Streptomyces Bacteriophage Abt2graduatex2 Yes
Erill, Caruso, et alIvan Erill, Steven M. Caruso, on behalf of the 2016 UMBC Phage Hunters 2017 Genome Announcements Complete Genome Sequences of Three phi29-Like Bacillus cereus Group Podoviridae Yes
Donegan-Quick et alRichard Donegan-Quick, Zane A. Gibbs, Patricia O. Amaku, Joshua T. Bernal, Dana A. M. Boyd, Angela R. Burr, Rainna E. Coelho, Akpedje S. Dossou, Ryan M. Henry, Mai Huynh, Thalia A. Kanani-Hendijani, Guillermina Martinez, Tianeaka O. McClendon-Moss, Sergio Orozco, Johnny M. San Martin, Kaitlyn E. Stoddart, Madison M. Stringer, Rachel L. Villegas, Subhayu Nayek, Nikita Suri, Rebecca A. Garlena, Daniel A. Russell, Lee E. Hughes 2017 Genome Announcements Genome Sequences of Five Streptomyces Bacteriophages Forming Cluster BG Yes
Kirk Anders, Marianne K. PoxlietnerKirk R. Anders, Alex M. Murphy*, William F. Ettinger, Douglas Kempthorne, Charles Kittridge, Alex Kures, Sarah Lundgren, Jacob Masters, Rachel Noyes, Christina Winters, Perry Yazzolino, Kasandra Ziebert, Joseph Haydock, Stephen Hayes, Rebecca A. Garlena, Daniel A. Russell, Marianne K. Poxleitner, Ann-Scott H. Ettinger 2017 Genome Announcements Genome Sequences of Cluster K Mycobacteriophages DrHayes, Urkel, and SamuelLPlaqson Yes
Layton et alLayton SR, Hemenway RM, Munyoki CM, Barnes EB, Barnett SE, Bond AM, Narvaez JM, Sirisakd CD, Smith BR, Swain J, Syed O, Bowman CA, Russell DA, Bhuiyan S, Donegan-Quick R, Benjamin RC, Hughes LE. 2016 Genome Announcements Genome Sequences of Streptomyces Phages Amela and Verse Yes
Erill, Caruso, et alIvan Erill, Steven M. Caruso, on behalf of the 2015 UMBC Phage Hunters 2016 Genome Announcements Genome Sequence of Bacillus cereus Group Phage SalinJah Yes
Abraham, Bousquet, Bruff, et alJ. Abraham, A.-C. Bousquet, E. Bruff, N. Carson, A. Clark, A. Connell, Z. Davis, J. Dums, C. Everington, A. Groth, N. Hawes, N. McArthur, C. McKenney, A. Oufkir, B. Pearce, S. Rampal, H. Rozier, J. Schaff, T. Slehria, S. Carson, E. S. Miller 2016 Genome Announcements Paenibacillus larvae Phage Tripp Genome Has 378-Base-Pair Terminal Repeats Yes
Carson et alCarson S, Bruff E, DeFoor W, Dums J, Groth A, Hatfield T, Iyer A, Joshi K, McAdams S, Miles D, Miller D, Oufkir A, Raynor B, Riley S, Roland S, Rozier H, Talley S, Miller ES. 2015 Genome Announcements Genome Sequences of Six Paenibacillus larvae Siphoviridae Phages Yes
Pope WH et alPope WH, Carbonara ME, Cioffi HM, Cruz T, Dang BQ, Doyle AN, Fan OH, Gallagher M, Gentile GM, German BA, Farrell ME, Gerwig M, Hunter KL, Lefever VE, Marfisi NA, McDonnell JE, Monga JK, Quiroz KG, Pong AC, Rimple PA, Situ M, Sohnen PC, Stockinger AN, Thompson PK, Torchio NM, Toner CL, Ulbrich MC, Vohra NI, Zakir A, Adkins NL, Brown BR, Churilla BM, Kramer ZJ, Lapin JS, Montgomery MT, Prout AK, Grubb SR, Warner MH, Bowman CA, Russell DA, Hatfull GF. 2015 Genome Announcements Genome Sequences of Mycobacteriophages AlanGrant, Baee, Corofin, OrangeOswald, and Vincenzo, New Members of Cluster B. Yes
Erill, Caruso, et alIvan Erill, Steven M. Caruso, on behalf of the 2013 UMBC Phage Hunters 2015 Genome Announcements Genome Sequences of Two Bacillus cereus Group Bacteriophages, Eyuki and AvesoBmore Yes
Erill, Caruso, et alIvan Erill, Steven M. Caruso, on behalf of the 2014 UMBC Phage Hunters 2015 Genome Announcements Complete Genome Sequence of Bacillus cereus Group Phage TsarBomba Yes
Breakwell, Barrus, Benedict, et alBreakwell DP1, Barrus EZ, Benedict AB, Brighton AK, Fisher JN, Gardner AV, Kartchner BJ, Ladle KC, Lunt BL, Merrill BD, Morrell JD, Burnett SH, Grose JH. 2013 Genome Announcements Genome sequences of five b1 subcluster mycobacteriophages Yes
Hatfull et alHatfull GF; Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science (SEA-PHAGES) Program; KwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH) Mycobacterial Genetics Course; University of California—Los Angeles Research Immersion Laboratory in Virology; Phage Hunters Integrating Research and Education (PHIRE) Program 2013 Genome Announcements Complete genome sequences of 63 mycobacteriophages Yes
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