SEA-PHAGES Logo

The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

Welcome to the forums at seaphages.org. Please feel free to ask any questions related to the SEA-PHAGES program. Any logged-in user may post new topics and reply to existing topics. If you'd like to see a new forum created, please contact us using our form or email us at info@seaphages.org.

All posts created by Tamarah_Adair

| posted 07 Apr, 2021 19:46
OK. Thanks.
Posted in: Cluster AV Annotation TipsAV gene overlap
| posted 07 Apr, 2021 19:46
OK. Thanks.
Posted in: Cluster AV Annotation TipsAV gene overlap
| posted 05 Apr, 2021 21:44
We are curious about the overlapping genes called in the AV cluster, such as Nellie 29/30 and Jasmine 32/33. Is there any information on this type of overlap being found in other phages or something else I am missing out on here? Thanks.
Posted in: Cluster AV Annotation TipsAV gene overlap
| posted 10 Aug, 2018 01:59
The best I can figure is that it has to do with the OS. Baylor has 10.12.6 (which will not copy and paste from documentation) and I have 10.13.6 (which will copy and paste from documentation). Kristen- I'm just wondering which version are you using?

I was able to use a PC and OH MY what a difference. Best wishes!
Posted in: DNA MasterCopy and paste in DNA Master
| posted 08 Aug, 2018 21:56
`Well that didn't work. HMMM…
Posted in: DNA MasterCopy and paste in DNA Master
| posted 08 Aug, 2018 12:35
Thanks Kristen. I tried this also and I am not able to paste into the text editor. I was sure that I had been able to do this before, so I tried again at home. I have an imac with a different mouse and I am able to copy and paste from documentation to documentation. I am going to test this at work today. Are you using an Apple Mouse?
Posted in: DNA MasterCopy and paste in DNA Master
| posted 07 Aug, 2018 21:55
I am not able to Copy/Paste from documentation to documentation. It works from Notes to documentation, but not from documentation to documentation or documentation to anywhere. It looks like it has been selected and copied, but there is no way to paste. The preferences in X11 must be on or it would not copy/paste in other places, right?
Posted in: DNA MasterCopy and paste in DNA Master
| posted 24 Jul, 2018 17:44
Thanks
Posted in: PECAANNew Features in PECAAN
| posted 24 Jul, 2018 15:50
Hi Claire,
I have used Pecaan to annotate Sonali. This is the first time I have used it and I am now exporting the files. Is there a way to place the Function in the Function box for the complete annotations?
Thank you,
Tammy
Posted in: PECAANNew Features in PECAAN
| posted 11 Jun, 2018 20:37
We have tested these primers specific for the tapemeasure protein for Arthrobacter phages isolated on ATCC 21022.
Posted in: ArthrobacterArthrobacter Cluster specific primers