Link to this post | posted 09 Apr, 2018 20:53
Tamarah_Adair	Does anyone have the genome sequence of Arthrobacter sp. ATCC 21022?

Link to this post | posted 25 Jan, 2018 01:59
Tamarah_Adair	I think there must have just been a glitch on Monday? Everything was working fine today. Thanks.

Link to this post | posted 23 Jan, 2018 15:03
Tamarah_Adair	Thanks. We will try again.

Link to this post | posted 23 Jan, 2018 02:39

Tamarah_Adair

Keith Hutchison Tamarah Adair Is the link on the http://cobamide2.bio.pitt.edu/computer.htm working? We are having difficulty today getting an updated version that will auto-annotate. We have tried the slip stream file and it still does not work. Last week we were not having this issue. Thanks! Tamarah, I had two students with a similar problem. In both cases when I had them check the version number it was 5.22.21 which is way out of date. In both cases they'd used the link on seaphages.org. In both cases if they deleted the installation and downloaded from the link on phagesdb.org it fixed the problem. Keith Both of these links take me to the same web page. Am I missing something?

Link to this post | posted 22 Jan, 2018 23:01
Tamarah_Adair	Is the link on the http://cobamide2.bio.pitt.edu/computer.htm working? We are having difficulty today getting an updated version that will auto-annotate. We have tried the slip stream file and it still does not work. Last week we were not having this issue. Thanks!

Link to this post | posted 17 Jan, 2018 16:30

Tamarah_Adair

We were having some problems with DNAMaster in Wine last week, but I think we have them resolved. After starting the program, use Help/Update to make sure you have the most recent build installed. Then File/Quit (Don't Quit Wine/ Quit DNAMaster.)Reopen DNA Master and check under About to see if you have the Dec2017 build. Then use the information in the attached pdf to make sure you fix the settings that have to do with the server settings. Make sure you Apply/OK/Save the settings. Then File/Quit again. These settings should work for auto-annotation. 166Kb

Link to this post | posted 17 Jan, 2018 14:21

Tamarah_Adair

We have been working on designing PCR primers specific for Arthobacter phage isolated on the ATCC 21022 host. We need samples of phage lysate and DNA from phages in clusters AM, AP, AR, AS, AT and AV. Is this a request that should go to the Univ of Pittsburg archive or should I reach out to individuals? The samples should be sent to Tamarah Adair Baylor University Dept of Biology 101 Bagby BSB Room B207 Waco, TX 76706 Thanks!

Link to this post | posted 03 Oct, 2017 18:28
Tamarah_Adair	When we ran Yeezus through Pecaan using the autoannotate tool, it did not return the full genome. Is there a work around for this? Also, when we open the Starterator file for Yeezus, the gene numbers are not lining up with the DNAMaster file made using the documentation from Pecaan. Any ideas there? Thanks!

Link to this post | posted 29 Aug, 2017 19:59
Tamarah_Adair	Thank you Chris for posting those instructions and Claire and all for making this available. This is great!

Link to this post | posted 29 Aug, 2017 19:39
Tamarah_Adair	Thanks!