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Frameshifts and Introns

While frameshifts and introns are likely used by phages in other genes, we do not have any wet bench evidence to support their existence in any other genes at this time. Therefore, there should not be any other frameshifts in the annotation other than in the tail assembly chaperones, and there should not be any other introns other than in the Cluster J phages similar to LittleE or BAKA. If you have strong evidence for an intron ( a disruption in an essential gene, like the capsid or portal) please post! If you want to know if your phage has a findable frameshift, please also check the cluster specific annotation forums before posting.
Topics Posts Views Last post
Finding introns
5 43 Oct 4, 2019
1:28 PM
Singleton FuzzBuster Frameshift
5 22 Jun 3, 2019
4:12 PM
Help with frameshift annotation in A1 phage
6 29 May 28, 2019
10:47 AM
Cluster CZ4 Frameshift
3 20 May 7, 2019
3:50 PM
tail assembly chaperones in Microbacterium foliorum EA1 phages
2 24 Mar 27, 2019
2:22 PM
Possible translational frameshift in Cluster J
3 19 Mar 26, 2019
10:59 AM
Putative Frameshift in a Reverse gene in N-Cluster Phage BabeRuth
2 25 Nov 19, 2018
12:51 PM
New Frameshift in K5 bacteriophage RtcB-ligase ?
3 22 Jul 17, 2018
4:42 PM
Annotating the CR3 Frameshift
1 13 Jul 8, 2018
7:34 PM
New frameshift in an A1 phage?
7 52 Jun 26, 2018
5:14 PM
Annotation advise: Frameshift in EA1
5 81 Apr 26, 2018
10:28 PM
Frameshift-C1
4 35 Apr 13, 2018
10:38 AM
Annotation advise: Frameshift in A4
4 39 Feb 21, 2018
2:21 PM
CZ1 Tail assembly proteins
7 76 Feb 21, 2018
1:35 PM
Annotation Advise: Frameshift  [Closed]
5 183 Feb 21, 2018
10:56 AM

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