The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.
Written by on Jan. 15, 2025 .
We are pleased to announce a new guide for phage genome annotation in your SEA-PHAGES courses. The Phage Genomics Guide is an update to the SEA-PHAGES Bioinformatics Guide that uses the same accessible platform as the new Phage Discovery Guide.
https://genomicsguide.seaphages.org/
The guide content is organized around the three ...
Written by on Jan. 31, 2019 in GenBank Submissions and Release Dates.
Below is a live spreadsheet showing the numbers assigned by GenBank to phage annotations that have been submitted and are soon to be (or have been) released.
CLICK HERE TO OPEN IN A NEW WINDOW
Written by on Oct. 30, 2017 .
Embedded below is the list of approved functions and specific names for those functions. Any functional calls you make should come from this list and use the naming conventions here. If you think you've found a function not on this list, please request that it be added at the appropriate forum.
CLICK HERE to ...
Written by on April 4, 2017 .
With the constant influx of new software tools, new genomes, and new publications, the way we annotate genomes is always changing. We always know a bit more than we did last year, and often a lot more than we did 5 years ago.
This leads to an inherent problem, however, ...
Written by on Jan. 13, 2015 .
The revised DNA Master Annotation Guide is available on PhagesDB and the sea-wiki. Below are some important revisions to note.
June 21, 2025 to June 28, 2025
July 12, 2025 to July 18, 2025
May 17, 2025 to May 23, 2025
April 25, 2025 to April 27, 2025
cdshaffer posted in lysin A
cdshaffer posted in deoxycytidylate deaminase OR nucleoside deoxyribosyltransferase.
cdshaffer posted in Terminase, small subunit in right arm