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The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

Posts tagged: Annotation

Official Function List

Embedded below is the list of approved functions and specific names for those functions. Any functional calls you make should come from this list and use the naming conventions here. If you think you've found a function not on this list, please request that it be added at the appropriate forum.

CLICK HERE to ...

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Annotation Forum Reorganization

An Inherent Problem with Annotation

With the constant influx of new software tools, new genomes, and new publications, the way we annotate genomes is always changing. We always know a bit more than we did last year, and often a lot more than we did 5 years ago.

This leads to an inherent problem, however ...

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Annotation: What's new in 2014-15?

The revised DNA Master Annotation Guide is available on PhagesDB and the sea-wiki.  Below are some important revisions to note.

  • The process for submitting genomes for annotation QC has changed slightly.  You are asked to submit two .dnam5 files.  Particular attention to functional calls is needed.
  • Start-site decision-making has been modified to ...

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Current Events

Install software for Bioinformatics Workshop and Semester

November 1, 2017 to December 1, 2017

Upcoming Events

Submit DNA Samples [Semester Schools]

November 21, 2017

Submit Lysates for Archiving

November 21, 2017 to December 15, 2017

Bionformatics Workshop

December 8, 2017 to December 12, 2017

Recent Events

Phall Phage Phair

November 17, 2017

Forum Activity

cdshaffer posted in glycosylase or N-glycosidase

beckiebortz posted in FIC family protein

Viknesh Sivanathan posted in Bacteriophage Microbiologist Position

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