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The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

Posts by: Dan

Sequencing Status 2021-22

Below is a live spreadsheet showing the status of SEA-PHAGES sequencing samples for the 2021-22 academic year. Generally, samples are only listed after they're scheduled for a MiSeq run, so don't worry if the samples you sent haven't appeared yet.

CLICK HERE to open this in a new browser window.

 

Sequencing Information: 2021-22

It's getting towards that time of year again: time to send SEA-PHAGES DNA samples in to be sequenced at Pitt!

Contact Us/Questions

Please send any questions about the information below to Dan (dar78@pitt.edu) and Becky (rag4@pitt.edu).

Sample Submission Form

Please submit the information about the samples you are sending using this Google Form. This ...

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Archiving Information 2021-22

The procedure for sending archiving samples to the University of Pittsburgh is largely similar this year, but please read carefully.

Note that you do not need to add beads to tubes anymore.

Contact Us/Questions

Please send any questions about the information below to Debbie (djs@pitt.edu) and Becky (rag4@pitt.edu).

Please read the latest Archiving Instructions ...

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Archiving Information 2020-21

The procedure for sending archiving samples to the University of Pittsburgh is largely similar this year, with two important changes.

  1. Our shipping address has changed—see below for the new address.
  2. We are asking you to fill out a quick form to let us know what you're sending and help us track your package.

Contact Us/Questions ...

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Sequencing Information 2020-21

Sequencing Information 2020-21

It's been a weird year, but through many trials and adjustments we have still arrived at phage DNA sequencing season! This post contains information about sending your SEA-PHAGES phage DNA samples to the University of Pittsburgh for sequencing. Because of the pandemic and other issues, several things have changed since previous years, so please read ...

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tRNAScanSE is Offline due to California Wildfires

As of August 21, 2020, tRNAScanSE is offline because it is hosted at the University of California, Santa Cruz, and their campus is facing a mandatory evacuation due to the ongoing wildfires. In the meantime, you can still use Aragorn for tRNA purposes. We'll update when we have more information.

Microbacterium Phage Paper

Microbacterium Phage Paper

Our collective paper on the genomes and diversity of 116 Microbacterium phages is now published and live in PLOS ONE.

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SEA-PHAGES and PHIRE Contributors to the Microbacterium sp. Paper

Genomic diversity of bacteriophages infecting Microbacterium spp.

SEA-PHAGES and PHIRE Contributors

PDF Version

SEA-PHAGES participants

HHMI at University of Maryland, Baltimore County

Ilzat Ali

Aleem Mohamed

Emily Davis

Acacia Eleri Jones (Keele University)

Indian River State College

Josh Moreno

Brandon Bryant

Ariana Burch

Rhode Dorissaint

Cayce Douthitt

Jeffrey Garafalo

Jaclyn Kuiack

Samuel Marcillon

Jordan Norus ...

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Sequencing Information 2019-20

It's sequencing season! This post contains some information on sending your SEA-PHAGES phage DNA samples to the University of Pittsburgh for sequencing. Most of the information is the same as last year, but please note that our lab has moved to a new building and the shipping address has changed.

Sample Submission Form

Please ...

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Sequencing Status 2019-2020

Below is a live spreadsheet showing the status of SEA-PHAGES sequencing samples for the 2019-20 academic year. Generally, only samples in the "priority" queue will be listed, and it may take a few days after receipt of samples for them to appear.

CLICK HERE to open this in a new browser window.

 

Upcoming Events

Recent Events

Phage Discovery Workshop 15B

July 9, 2022 to July 15, 2022

Phage Discovery Workshop 15A

June 25, 2022 to July 1, 2022