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The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

Welcome to the forums at seaphages.org. Please feel free to ask any questions related to the SEA-PHAGES program. Any logged-in user may post new topics and reply to existing topics. If you'd like to see a new forum created, please contact us using our form or email us at info@seaphages.org.

All posts created by scresawn

| posted 04 Apr, 2017 18:52
This took a bit longer due to some VERY slow shipping on a piece of network equipment. Nevertheless, the work is now complete.
Posted in: Web PhameratorDowntime due to server maintenance
| posted 08 Mar, 2017 17:44
Hi everyone,

In order to provide a more robust and scalable phamerator.org, we are performing a major upgrade on our server equipment. Please expect intermittent downtime through the end of the week. I'll post an update here when the work is complete.

Thanks for your patience.

Steve
Edited 08 Mar, 2017 21:47
Posted in: Web PhameratorDowntime due to server maintenance
| posted 27 Sep, 2016 15:07
Hi Jordan,

You're right, we've been having some intermittent trouble with the app this year, mostly on the server side but it manifests as not being able to load the map. My students and I are working on the problem and hope to have a substantially improved version in place for next year. Thanks for your patience with it.

Best,
Steve
Posted in: SEA-PHAGES Appa work in progress
| posted 27 Feb, 2016 22:26
Like Jordan, I've had the problem even with single gene BLAST submissions.

S.
Posted in: DNA MasterBLAST in DNAM
| posted 24 Sep, 2015 19:58
You can also do this in Phamerator:

1. Click "Phages"
2. Highlight your phage in the list
3. From the File menu, "Export Proteins (fasta)"
Posted in: DNA MasterExport all protein sequences from a genome
| posted 01 Sep, 2015 17:00
Yesterday was a big moment for the SEA-PHAGES app. It was the first time that we moved out of testing and had large numbers of real people were using the app for their sample collection. This morning, an error occurred that resulted in the loss of data entered after 8/29/15. To those of you who made accounts or added samples on 8/30 or 8/31, your information has been lost, and I'm personally very sorry for the inconvenience this causes.

As I work to put measures into place to prevent these types of issues in the future, I would ask that you please not give up on the app. If your account was deleted, please make a new one and add your sample back to the app. When you add a sample, it is added at your current position. However, you can "unlock" the map by tapping the lock icon, and then drag the marker to the correct position. Once you have done that, you'll see a message at the top of the screen that says "undo move sample?". Tap anywhere else on the screen to confirm that you meant to move it, and then tap the red lock icon to re-lock the map. You'll also want to correct the date associated with the sample, since it defaults to the date that you re-add the sample to the map. To fix this, click the menu bottom (3 horizontal lines), and edit the date field.

Again, my apologies. Please bear with us as we grow.
Posted in: SEA-PHAGES Appa work in progress