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Recent Activity
Debbie Jacobs-Sera posted in Whole phage starterator reports
cdshaffer posted in Whole phage starterator reports
Shallee Page posted in Plaques appear on spot test, don't appear in titer
Viknesh Sivanathan posted in Plaques appear on spot test, don't appear in titer
Debbie Jacobs-Sera posted in Plaques appear on spot test, don't appear in titer
All posts created by sahas
| Link to this post | posted 25 Jan, 2022 19:41 | |
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Thank you! |
Posted in: General Message Board → Electron Microscopy
| Link to this post | posted 25 Jan, 2022 15:20 | |
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Thank you so much, I will certainly explore this. |
Posted in: General Message Board → Electron Microscopy
| Link to this post | posted 21 Jan, 2022 21:42 | |
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Hi I was wondering if anyone can recommend a place/lab to send our samples for electron microscopy? We haven't been successful in finding a resource yet. Any help will be highly appreciated. Thanks Sangha |
Posted in: General Message Board → Electron Microscopy
| Link to this post | posted 25 Feb, 2021 16:08 | |
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I was having trouble with installing DNA Master and then came across these posts! I will follow your lead to get it back up and running. I had uninstalled it as I was not able to get any BLAST results. |
Posted in: DNA Master → DNA master server down?
| Link to this post | posted 11 Apr, 2017 16:08 | |
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cdshaffer Sorry, it is indeed a Cluster N phage but is not in Phamerator |
Posted in: Phamerator → Missing phage in Phamerator database
| Link to this post | posted 10 Apr, 2017 21:45 | |
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Hi I might have missed seeing this, but are some L4 phages like Purgamenstris missing from the database? Thanks Sangha |
Posted in: Phamerator → Missing phage in Phamerator database
| Link to this post | posted 10 Apr, 2017 21:41 | |
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Hi I was checking a student's annotation for Bigswole, a C1 phage and noticed that it has a large number of tRNAS. However Among the tRNA genes, there is a long ORF OF 1253 bp (DNAM 273) , and one of 425 bp (DNAM 278 ) in between all of them. Is that valid? I am attaching the file here, which have a few genes that are annotated. Would appreciate some feedback. Thank you Sangha |
1.07MbPosted in: Gene or not a Gene → C1 phage
| Link to this post | posted 29 Apr, 2016 00:55 | |
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Thank you so much Chris. Really appreciate it.I had started doubting myself whether I knew how to run starterator! |
| Link to this post | posted 26 Apr, 2016 20:39 | |
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Hello Sorry to bother you again. I have been trying to run Starterator for Kerberos but it seems to stall after Pham 61. Can you please check? Many thanks Sangha |
| Link to this post | posted 01 Apr, 2016 15:39 | |
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I had a similar problem that I got back only tRNA calls on Tuesday of this week. |
Posted in: DNA Master → Glimmer Failure on Auto Annotation