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Recent Activity
Annotation advise: Frameshift in A4
| Link to this post | posted 20 Feb, 2018 21:50 | |
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What appears (to my eyes) to be a correctly annotated frameshift is getting the attached error when we click "validate", and another group is seeing the same thing multiplied. I don't know what this means. Have you seen this before? Is it an issue, and if so is there a solution? |
1Kb| Link to this post | posted 20 Feb, 2018 21:52 | |
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This is what the annotation looks like. |
37Kb| Link to this post | posted 21 Feb, 2018 16:44 | |
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Hi Joann, Did you remember to change the number of regions in the description tab to "2" ? Best, Welkin |
| Link to this post | posted 21 Feb, 2018 19:21 | |
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Welkin Pope I just double checked–and the number of regions in the description tab is set to 2. Still see same validation error message(s). We are also seeing "15102 - 15473 and share a 5' (upstream) coordinate"–am assuming is a valid warning since the properly annotated longer (downstream) gene will share a start site with the upstream gene. I've tried several other things to try and get rid of the following without success. "join(0. .0;0. .0) Incorrect region counts" or "complement (join(0. .0)) Region lengths not correct" Looks like this is a different issue. I'll create a new topic (validation errors) and will post more details there. |