SEA-PHAGES Sections
1
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: Dana Pape-Zambito
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 13
Freshmen: 13
Meetings per week: 2
Hours per week: 6.0
BIO 150L D01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 6
Freshmen: 6
Meetings per week: 2
Hours per week: 6.0
BIO 150L D02
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 13
Freshmen: 13
Meetings per week: 2
Hours per week: 6.0
BIO 150L HN2
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 4.0
BIO 150L: FY1
Primary Instructor: Julia Lee-Soety
Additional Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 14
Freshmen: 14
Meetings per week: 2
Hours per week: 4.0
BIO 150L: FY2
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: Julia Lee-Soety
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 4.0
BIO 150L: FY3
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: Julia Lee-Soety
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 4.0
BIO 151L D01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 18
Freshmen: 18
Meetings per week: 2
Hours per week: 2.5
BIO 151L D01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 18
Freshmen: 18
Meetings per week: 2
Hours per week: 2.5
BS-136-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 11
Freshmen: 11
Meetings per week: 2
Hours per week: 6.0
BS-136-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Microbacterium foliorum
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 6.0
DOGEMS deconvolution followed by annotation
BS-136-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Microbacterium foliorum
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 6.0
BS-136-02
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 6.0
BS-137-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: No host information yet.
Number of students: 7
Freshmen: 7
BS-137-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 13
Freshmen: 13
Meetings per week: 2
Hours per week: 6.0
BS-137-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 15
Freshmen: 15
Meetings per week: 2
Hours per week: 6.0
all online (combination synchronous/asynchronous)
BS-137-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Microbacterium foliorum
Number of students: 12
Freshmen: 12
Meetings per week: 2
Hours per week: 6.0
DOGEMS deconvolution followed by annotation
BS-137-02
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: No host information yet.
Number of students: 16
Freshmen: 16
BS-137-02
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 6.0
BS-137-02
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Microbacterium foliorum
Number of students: 13
Freshmen: 13
Meetings per week: 2
Hours per week: 6.0
BS130L-32, BS490-02
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 20
Freshmen: 20
Meetings per week: 2
Hours per week: 6.0
BS131L-35, BS490-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: No host information yet.
Number of students: 14
Freshmen: 14
Meetings per week: 2
Hours per week: 6.0
2, 3hr meetings each week. The first 4 weeks are spent identifying which phage(s) were sequenced via DOGEMS (wet bench research), and the remainder of the semester is spent annotating those genomes.
BS131L-35, BS490-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: Dana Pape-Zambito
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 11
Freshmen: 11
Meetings per week: 2
Hours per week: 6.0
BS136-02
Primary Instructor: C. Nicole (Nikki) Sunnen
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 23
Freshmen: 23
Meetings per week: 2
Hours per week: 6.0
BS137-02
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: C. Nicole (Nikki) Sunnen
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 22
Freshmen: 22
Meetings per week: 2
Hours per week: 6.0
DOGEMS deconvolution followed by annotation.