d.pape-zambito@usciences.edu
University of the Sciences (now St. Joseph's Univ)
Assistant Professor
Biological Sciences
SEA-PHAGES Sections
1
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: Dana Pape-Zambito
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 13
Freshmen: 13
Meetings per week: 2
Hours per week: 6.0
BS-136-01
Primary Instructor: Dana Pape-Zambito
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 6.0
BS-136-02
Primary Instructor: Dana Pape-Zambito
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 14
Freshmen: 14
Meetings per week: 2
Hours per week: 6.0
BS-136-02
Primary Instructor: Dana Pape-Zambito
Type: In situ (phage discovery/microbiology)
Hosts used: Microbacterium foliorum
Number of students: 17
Freshmen: 17
Meetings per week: 2
Hours per week: 6.0
BS-137-01
Primary Instructor: Dana Pape-Zambito
Type: In silico (phage genomics/bioinformatics)
Hosts used: Streptomyces platensis, Microbacterium foliorum
Number of students: 15
Freshmen: 15
Meetings per week: 2
Hours per week: 6.0
We isolated from M. foliorum in the fall, and have adopted a S. platensis phage for additional annotation.
BS130L-31, BS490-01
Primary Instructor: Dana Pape-Zambito
Additional Instructor: Dana Pape-Zambito
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 15
Freshmen: 15
Meetings per week: 2
Hours per week: 6.0
BS131L-35, BS490-01
Primary Instructor: C. Nicole (Nikki) Sunnen
Additional Instructor: Dana Pape-Zambito
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 11
Freshmen: 11
Meetings per week: 2
Hours per week: 6.0
BS131L-36, BS490-02
Primary Instructor: Dana Pape-Zambito
Type: In silico (phage genomics/bioinformatics)
Hosts used: No host information yet.
Number of students: 16
Freshmen: 16
Meetings per week: 2
Hours per week: 6.0
2, 3hr meetings each week. The first 4 weeks are spent identifying which phage(s) were sequenced via DOGEMS (wet bench research), and the remainder of the semester is spent annotating those genomes.
BS136-01
Primary Instructor: Dana Pape-Zambito
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 22
Freshmen: 22
Meetings per week: 2
Hours per week: 6.0
BS137-03
Primary Instructor: Dana Pape-Zambito
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 15
Freshmen: 15
Meetings per week: 2
Hours per week: 6.0
DOGEMS deconvolution followed by annotation.