Welcome to the forums at seaphages.org. Please feel free to ask any questions related to the SEA-PHAGES program. Any logged-in user may post new topics and reply to existing topics. If you'd like to see a new forum created, please contact us using our form or email us at info@seaphages.org.
Recent Activity
All posts created by robert.logan
Link to this post | posted 29 Jun, 2023 18:48 | |
---|---|
|
I confirm that this also occurs in the draft genome DejaVu (ED1) between the PECAAN called genes #51 and #52. Both of these genes encode for a tail assembly chaperone protein. The genomic loci are CDS join (24677. .25339;25339. .2655
Robert Logan, Ph.D.
Assistant Professor of Biology Eastern Nazarene College, Quincy, MA 02170 |
Posted in: Cluster ED Annotation Tips → Frame shift in cluster ED
Link to this post | posted 03 Jun, 2023 15:48 | |
---|---|
|
I confirm that this also occurs in the draft genome ASegato (ED2) between the PECAAN called genes #47 and #48. Both of these genes encode for tail assembly chaperone proteins. The genomic loci are CDS join (25411. .26006;26006. .26558 )
Robert Logan, Ph.D.
Assistant Professor of Biology Eastern Nazarene College, Quincy, MA 02170 |
Posted in: Cluster ED Annotation Tips → Frame shift in cluster ED
Link to this post | posted 29 Jan, 2023 22:06 | |
---|---|
|
debbie Hi Debbie, That worked beautifully. Thank you!
Robert Logan, Ph.D.
Assistant Professor of Biology Eastern Nazarene College, Quincy, MA 02170 |
Posted in: DNA Master → Glimmer failure during autoannotation
Link to this post | posted 29 Jan, 2023 21:36 | |
---|---|
|
I also get a Glimmer failure error when trying to auto-annotate.
Robert Logan, Ph.D.
Assistant Professor of Biology Eastern Nazarene College, Quincy, MA 02170 |
Posted in: DNA Master → Glimmer failure during autoannotation