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Best Gordonia model for GeneMark

| posted 29 Jan, 2018 19:00
Unless I missed it, there is no Gordonia terrae in GeneMark list but there is a Gordonia species. Have people used the GeneMark output trained on this Gordonia species? Is it better to use the heuristic GeneMark only or both outputs? Cheers, Veronique
Edited 21 Feb, 2018 16:13
| posted 21 Feb, 2018 16:14
Hi Veronique,
Excuse me for retitling your thread— we are trying to make them as specific as possible.

Yes, go ahead and use the Gordonia model that they list on the GeneMark website for the host model. It has worked just fine for me.

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