SEA-PHAGES Sections
BIO 110- Fall 2023
Primary Instructor: Dane Bowder
Type: In situ (phage discovery/microbiology)
Hosts used: Gordonia terrae
Number of students: 18
Freshmen: 13
Sophomores: 3
Juniors: 2
Meetings per week: 2
Hours per week: 4.0
BIO 110-1
Primary Instructor: Dane Bowder
Type: In situ (phage discovery/microbiology)
Hosts used: Gordonia terrae
Number of students: 12
Freshmen: 10
Sophomores: 2
Meetings per week: 2
Hours per week: 4.0
We will be piloting Gordonia in this Spring section to prepare to move hosts. If we are unsuccessful in finding any phages- we will move back over to Mycobacterium smegmatis.
BIO 110-1
Primary Instructor: Dane Bowder
Additional Instructor: Erin Doyle
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 19
Freshmen: 16
Sophomores: 2
Seniors: 1
Meetings per week: 2
Hours per week: 4.0
BIO 110-1 Inquiry Lab
Primary Instructor: Dane Bowder
Type: In situ (phage discovery/microbiology)
Hosts used: Gordonia terrae
Number of students: 19
Freshmen: 18
Sophomores: 1
Meetings per week: 2
Hours per week: 3.0
BIO 110-2
Primary Instructor: Dane Bowder
Additional Instructor: Dane Bowder
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 18
Freshmen: 16
Sophomores: 2
Meetings per week: 2
Hours per week: 4.0
BIO 110-3
Primary Instructor: Dane Bowder
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 17
Freshmen: 17
Meetings per week: 2
Hours per week: 4.0
BIO 110-4
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: In situ (phage discovery/microbiology)
Hosts used: Mycobacterium smegmatis
Number of students: 18
Freshmen: 18
Meetings per week: 2
Hours per week: 4.0
BIO 220- Phage Genome Annotati
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Additional Instructor: Erin Doyle
Type: In silico (phage genomics/bioinformatics)
Hosts used: Gordonia terrae
Number of students: 5
Freshmen: 4
Juniors: 1
Meetings per week: 2
Hours per week: 2.0
BIO 271
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: In silico (phage genomics/bioinformatics)
Hosts used: Gordonia terrae
Number of students: 1
Sophomores: 1
Meetings per week: 2
Hours per week: 3.0
BIO 271- Phage Genome Annotati
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: In silico (phage genomics/bioinformatics)
Hosts used: Gordonia terrae
Number of students: 17
Freshmen: 9
Sophomores: 7
Juniors: 1
Meetings per week: 2
Hours per week: 3.0
BIO 271-1
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 16
Freshmen: 15
Sophomores: 1
Meetings per week: 2
Hours per week: 3.0
BIO 371
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: Other
Hosts used: Mycobacterium smegmatis
Number of students: 7
Sophomores: 7
Meetings per week: 2
Hours per week: 3.0
This class is writing an MRA over the phages that were annotated last semester.
BIO 371- Genome Publication
Primary Instructor: Dane Bowder
Additional Instructor: Dane Bowder
Type: Other
Hosts used: Gordonia terrae
Number of students: 7
Sophomores: 7
Meetings per week: 2
Hours per week: 3.0
BIO 371- Phage Genome Publicat
Primary Instructor: Dane Bowder
Additional Instructor: Erin Doyle
Type: Other
Hosts used: Gordonia terrae
Number of students: 5
Sophomores: 4
Juniors: 1
Meetings per week: 2
Hours per week: 2.0
BIO271 Phage Genome Annotation
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: In silico (phage genomics/bioinformatics)
Hosts used: Gordonia terrae
Number of students: 5
Freshmen: 4
Sophomores: 1
Meetings per week: 2
Hours per week: 2.5
BIO271 Phage Genome Annotation
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: In silico (phage genomics/bioinformatics)
Hosts used: Mycobacterium smegmatis
Number of students: 11
Freshmen: 5
Sophomores: 4
Juniors: 2
Meetings per week: 2
Hours per week: 2.5
BIO371
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: Other
Hosts used: Gordonia rubripertincta
Number of students: 3
Sophomores: 3
Meetings per week: 3
Hours per week: 3.0
This section will study the scientific publication process through writing an MRA over the genomes annotated at Doane last spring.
Phage Genome Publication
Primary Instructor: Erin Doyle
Additional Instructor: Dane Bowder
Type: Other
Hosts used: Mycobacterium smegmatis
Number of students: 10
Sophomores: 6
Juniors: 4
Meetings per week: 2
Hours per week: 1.5
Class to write the genome announcement for phages annotated in last spring's annotation class.