Abstracts for the 2024 SEA Symposium
This meeting has 156 associated abstracts.
| Student-Presented Abstracts, Consider For Talks | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Advanced Bioinformatic Analysis (Cluster EA) |
Coppin State University | Dondra Bailey dbailey@coppin.edu |
Genome Annotation of the Mycobacterium phage Delphidian | Mar 22, 2024 11:10 a.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster G) |
La Sierra University | Arturo Diaz adiaz@lasierra.edu |
Characterization of the 4 HNH Endonucleases encoded within phage Bugger | Mar 18, 2024 3:55 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster A) |
LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Comparative Analysis of Cluster A Bacteriophage Tape Measure and Minor Tail Protein Phamilies | Mar 12, 2024 9:59 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster C) |
Purdue University | Kari Clase kclase@purdue.edu |
Mycobacteriophage and Human Histidine Triad Protein Homologs: Bridging Human Tumor Suppression and Bacteriophage Host Control | Mar 18, 2024 4 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster GI) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Characterization of Novel Cluster GI Through Intercluster and Cross-Host Analyses | Mar 18, 2024 6:19 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster AZ) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
A Comparative Analysis of Operon Gene Functions in Cluster AZ Phages | Mar 18, 2024 6:51 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis | University of Connecticut | Johann Gogarten gogarten@uconn.edu |
Intein Containing Genes in Actinophages From Subclusters A1 and C1 | Mar 18, 2024 2:48 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster A) |
La Sierra University | Arturo Diaz adiaz@lasierra.edu |
Nearly two thirds of the genes encoded in the first half of phage Jeeves are toxic when overexpressed in Mycobacterium smegmatis | Mar 18, 2024 11:52 a.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster I) |
Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Mousing Around with Bacteriophages: A Genetic, Biochemical, and Immunological Comparison of Island3 and Sbash | Mar 15, 2024 4:35 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster L) |
University of Ottawa | Adam Rudner arudner@uottawa.ca |
Unveiling Bromden's Secrets: A Nicotinate Ribosyltransferase as the Ultimate Power Play Gene | Mar 19, 2024 12:45 a.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster F) |
University of South Florida | Richard Pollenz pollenz@usf.edu |
Identification of Two Novel Immunity Genes in F2 Cluster Phage Avani | Apr 7, 2024 4:33 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
Austin Community College | Kissaou Tchedre kissaou.tchedre@austincc.edu |
Isolation and characterization of Bacteriophage Agaliana and Teodoridan at Austin Community College in Texas. | Apr 5, 2024 12:01 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster B) |
Bowling Green State University | Vipaporn Phuntumart vphuntu@bgsu.edu |
Annotation of genes associated with lytic life cycle of a cluster B1 lytic bacteriophage, Eugenia | Mar 22, 2024 11:28 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster F) |
College of William & Mary | Margaret Saha mssaha@wm.edu |
Doc and Deb's Wild Adventure: A Tale of Two F1 Phages | Mar 14, 2024 11:28 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster N) |
Hampden-Sydney College | Mike Wolyniak mwolyniak@hsc.edu |
Bosection 6: A novel Cluster N Mycobacterium smegmatis bacteriophage | Mar 18, 2024 4:15 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster C) |
Hope College | Joseph Stukey stukey@hope.edu |
Isolation and Genomic Analysis of New B3 and C1 Mycobacteriophages | Mar 18, 2024 10:35 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EE) |
Lee University | Joseph Daft jdaft@leeuniversity.edu |
Isolation and Annotation of Novel Phages Avvas and DaftyDuck | Apr 4, 2024 11:36 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster F) |
LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Isolation and Characterization of Mycobacterium phage FreddyB, the First Cluster F Phage Isolated in East Texas | Mar 20, 2024 1:22 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster FE) |
McGill University | Patrick Lypaczewski patrick.lypaczewski@mcgill.ca |
Genome Annotations of phages CabbageMan and SJReid | Mar 18, 2024 12:25 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EK) |
Miami University | Mitchell Balish balishmf@miamioh.edu |
Podo Parties with Phage Astartes: a New Subcluster EK2 Phage from Ohio | Mar 18, 2024 2:26 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DJ) |
New Mexico Institute of Mining and Technology | Linda DeVeaux linda.deveaux@nmt.edu |
Fazel, A Desert Phage in the DJ Cluster, Contains Seven Orphams | Mar 15, 2024 3:04 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster FD) |
New York Institute of Technology | Bryan Gibb bgibb@nyit.edu |
Cluster FD phage Swim has a linear genome and no integrase but still forms lysogens. | Mar 18, 2024 8:49 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster K) |
Saint Joseph's University | Julia Lee-Soety jlee04@sju.edu |
A Fungi-de to Bacteriophage Strobilo | Mar 18, 2024 9:38 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster F) |
Saint Joseph's University | Julia Lee-Soety jlee04@sju.edu |
Comparative Genomics of F1 Bacteriophages: Decoding the Genetic information of Jinglebell and PhesterPhotato | Mar 18, 2024 10:01 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Universidad Nacional de Rosario | Alejandra Mussi mussi@cefobi-conicet.gov.ar |
Discovery of indigenous phages of Microbacterium foliorum from various habitats of Argentina. | Mar 14, 2024 3:18 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Universidad Nacional de Rosario | Martín Espariz mespariz@fbioyf.unr.edu.ar |
Complete genome annotation and analysis of the Microbacterium foliorum bacteriophages Garey24 and Nicky22 | Mar 14, 2024 6:22 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Computational Analysis of Microbacterium Phage Kevanna Genome | Apr 2, 2024 4:38 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Annotation and Characterization of Mycobacterium Bacteriophage Jayhawk | Apr 2, 2024 4:57 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Complete Genome Sequence Annotation of Arthrobacter Bacteriophage Mudpuppy | Apr 2, 2024 5:11 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | University of Mary Washington | Lynn Lewis llewis@umw.edu |
Phage Hunting at the University of Mary Washington | Mar 22, 2024 8:44 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of North Georgia | Alison Kanak alison.kanak@ung.edu |
Isolation and Genome Characterization of Mycobacteriophage Mao1 | Mar 7, 2024 1:37 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of North Georgia | Alison Kanak alison.kanak@ung.edu |
Isolation and Characterization of Mycobacterium smegmatis Phage Landor | Mar 25, 2024 2:05 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster BD) |
University of North Texas | Lee Hughes lhughes@unt.edu |
Isolation, Characterization, and Genome Annotation of North Texas Streptomyces baarnensis bacteriophages ElGato, Jevington, and Samora | Mar 18, 2024 10:33 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster BD) |
University of North Texas | Lee Hughes lhughes@unt.edu |
Isolation and Characterization of Three Phages infecting Streptomyces baarnensis | Mar 18, 2024 10:35 p.m. |
Summary Word Doc |
| Other | Lehigh University | Vassie Ware vcw0@lehigh.edu |
SEA Expeditions in an Advanced Phage Research Course at Lehigh University | Mar 18, 2024 3:42 p.m. |
Summary Word Doc |
| Other | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Perceived Pre-, During, and Post-Annotation Student Difficulties and Confidence Levels While Annotating Their First Phage Genome | Mar 19, 2024 11:56 a.m. |
Summary Word Doc |
| Other (Cluster EE) |
Neumann University | Matthew Mastropaolo mastropm@neumann.edu |
Optimizing the Adsorption of Known Bacteriophage; JaimeB: A Comparative Study of Divalent and Monovalent Salts | Mar 15, 2024 3:40 p.m. |
Summary Word Doc |
| Other (Cluster A) |
University of Ottawa | Adam Rudner arudner@uottawa.ca |
Genetic characterization of super-infection immunity in AZ cluster phages | Mar 19, 2024 1:49 a.m. |
Summary Word Doc |
| Student-Presented Abstracts, DO NOT Consider For Talks | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Advanced Bioinformatic Analysis | James Madison University | Steven Cresawn cresawsg@jmu.edu |
Conservation of gap and overlap sizes between adjacent genes | Mar 18, 2024 4:34 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster DE) |
Kansas State University | Martha Smith-Caldas mscaldas@ksu.edu |
Flint Hills Phages - RiverRaider: the Saga of a Misfit | Mar 18, 2024 10:23 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster A) |
LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Comparative Analysis of Cluster A Mycobacteriophage Serine and Tyrosine Integrases | Mar 22, 2024 12:54 a.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster E) |
Saint Leo University | Iain Duffy iain.duffy@saintleo.edu |
Exploring Variability in E-Cluster Phages: Insights from Comparative Genomics Research | Mar 18, 2024 6:48 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster AO) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Comparative Genomics of the Tail Region in Cluster AO Phages | Mar 18, 2024 6:29 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster AZ) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Diverse intracluster and intercluster relationships between novel cluster AZ and EH bacteriophages | Mar 18, 2024 6:43 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster AZ) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Comparative Analysis of Integrase Diversity in Arthrobacter Bacteriophages | Mar 18, 2024 7:03 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster AZ) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Cross-host Comparison of AZ Subclusters Using Nucleotide and Protein Function Analysis | Mar 18, 2024 8:46 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Unveiling the Intercluster and Intracluster Dynamics of Mycobacterium, Rhodococcus, and Corynebacterium Phages Through Bioinformatic Analysis | Mar 18, 2024 7:26 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Investigation of Potential Genes Influencing Host Specificity in Cluster AZ1 and EH Phages | Mar 18, 2024 8:26 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Characterizing Genomic Similarities in Propionibacterium-Infecting Bacteriophages | Mar 18, 2024 8:44 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster AO) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Wyborn and Sicarius2 Exhibit Slight Divergence from Other Subcluster AO2 Phages | Mar 18, 2024 8:35 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster AZ) |
University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Conservation of Genes in the DNA-Binding Gene Cluster of Phage ShakeItOph | Mar 18, 2024 8:40 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Diversity in The Endolysin Gene of Arthrobacter sulfureus Bacteriophages: Genetic and Structural Insights | Mar 18, 2024 11:39 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster K) |
University of Colorado Boulder | Christy Fillman christy.fillman@Colorado.EDU |
Discovering Bacterial Defense Systems within Mycobacteriophage Miryou | Mar 18, 2024 7:14 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster DJ) |
University of North Florida | Denise Monti denise.monti@unf.edu |
A Walk through the Bacterial Landscape - An Investigation of Phams Containing Genes from Multiple Clusters | Mar 15, 2024 6:45 p.m. |
Summary Word Doc |
| Advanced Bioinformatic Analysis (Cluster FO) |
University of Southern California | Christa Bancroft cbancrof@usc.edu |
Using Phylogenetic Analysis to Compare FO cluster phage (JanetJ) to Phage in Other F Clusters | Mar 15, 2024 5:39 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster A) |
Coastal Carolina University | Daniel Williams dwilliams@coastal.edu |
Molecular Characterization of mycobacteriophage Refuge | Mar 15, 2024 1:42 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies | Colorado State University-Pueblo | Amaya Garcia Costas amaya.garciacostas@csupueblo.edu |
Using Cytotoxicity and Bacterial-2-Hybrid Assays to Investigate Phage Sheen Gene Functions | Mar 18, 2024 7:09 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster F) |
Saint Leo University | Iain Duffy iain.duffy@saintleo.edu |
CytoGenes: Deciphering the Potentially Cytotoxic Gene of Mycobacteriophage TootsiePop. | Mar 18, 2024 5:57 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster FI) |
SUNY Old Westbury | Jillian Nissen nissenj@oldwestbury.edu |
Investigating gene functions in the F1 cluster phage Akhila | Mar 16, 2024 3:29 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster K) |
Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Amplification and Cloning of Mycobacteriophage Pixie and ThetaBob Genes | Mar 14, 2024 5:44 p.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster N) |
University of Ottawa | Adam Rudner arudner@uottawa.ca |
Sorry Charlie! SEA-GENES takes on corporate marketing and a well-characterized cluster N phage | Mar 19, 2024 1:29 a.m. |
Summary Word Doc |
| Phage Gene Expression Studies (Cluster A) |
Winthrop University | Victoria Frost frostv@winthrop.edu |
Continued Characterization of Mycobacteriophage ExplosioNervosa | Mar 8, 2024 11:15 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DV) |
Albany College of Pharmacy and Health Sciences | Pradeepa Jayachandran pradeepa.jayachandran@acphs.edu |
Characterization and Genome Annotation of Actinobacteriophage MoiGyank | Mar 13, 2024 9:42 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster CZ) |
Albany College of Pharmacy and Health Sciences | Pradeepa Jayachandran pradeepa.jayachandran@acphs.edu |
Discovery and Characterization of Novel Actinobacteriophages Aria and Annalisa | Mar 13, 2024 10:07 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EF) |
Austin Peay State University | Sergei Markov markovs@apsu.edu |
Comparative genome analysis of cluster EF bacteriophages Ajin and OverHedge. | Mar 13, 2024 3:52 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster AZ) |
Baylor University | Tammy Adair tamarah_adair@baylor.edu |
The Discovery, Isolation, and Characterization of Arthrobacter Phage Sue2 | Mar 19, 2024 5:13 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Benedictine University | Tiara Perez Morales tperezmorales@ben.edu |
Arthrobacter sp. phage isolation and characterization using a variety of soil samples, a pilot study for a research classroom at Benedictine University | Mar 18, 2024 2:14 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Benedictine University | Tiara Perez Morales tperezmorales@ben.edu |
Characterization of Microbacterium foliorum phages isolated from public and private soil sites | Mar 18, 2024 2:17 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster CG) |
Calvin University | Randy DeJong rdejong@calvin.edu |
Phamtastic Phages and Where to Phind Them: Rhodococcus equi phages | Mar 19, 2024 11:59 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EC) |
Carthage College | Deb Tobiason dtobiason@carthage.edu |
The HankSprout (EA1) and Onika (EC) Chronicles: An Annotation Journey | Mar 18, 2024 1:03 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
Coastal Carolina University | Daniel Williams dwilliams@coastal.edu |
Genome annotation of the temperate A9 phage EmyBug | Mar 15, 2024 1:30 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster B) |
College of Charleston | Christine Byrum byrumc@cofc.edu |
Complete Genome Sequence of the Subcluster B13 Mycobacteriophage Hashim76 | Mar 17, 2024 9:50 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster L) |
College of Charleston | Christine Byrum byrumc@cofc.edu |
Isolation and Genomic Annotation of the L-Cluster Mycobacterium Bacteriophage Jobypre | Mar 17, 2024 9:58 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DJ) |
College of Southern Nevada | James Theoret james.theoret@csn.edu |
Isolation and genome annotation of the novel actinobacterial phage Eddiemania. | Mar 18, 2024 9:39 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster F) |
College of St. Scholastica | Daniel Westholm dwesthol@css.edu |
Lysogeny investigations in Cluster F1 Phages LittleShirley and Guppsters | Mar 19, 2024 10:33 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
Columbia State Community College | Elvira Eivazova eeivazova@columbiastate.edu |
Genome comparison of three A1 subcluster bacteriophages Dussy, Dexes and Manatee. | Mar 19, 2024 5:20 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster B) |
Culver-Stockton College | Sarah Reardon sreardon@culver.edu |
Isolation, Purification and Annotation of Novel Mycobacterium Phage JDog | Mar 28, 2024 10:52 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster CS) |
Doane University | Erin Doyle erin.doyle@doane.edu |
Annotation of Gordonia terrae Phage BigShaq in CS2 Subcluster | Mar 22, 2024 4:34 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster CT) |
Durham Technical Community College | Marie Fogarty fogartym@durhamtech.edu |
Phorget-Me-Not: Annotation of PotPie and Deconvolution of Gordonia Bacteriophages | Mar 15, 2024 9:29 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EG) |
Eastern Nazarene College | Robert Logan robert.logan@enc.edu |
Characterization and Genome Annotation of Judebell and RicoCaldo isolated from Microbacterium foliorum | Mar 20, 2024 3:04 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EE) |
Florida International University | Jaime Mayoral mayoralj@fiu.edu |
Discovery and Genome Annotation of the New Phage, Biscayne, discovered in Miami | Mar 18, 2024 9:25 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster GA) |
Florida International University | Jaime Mayoral mayoralj@fiu.edu |
Discovery and Annotation of a New Bacteriophage, Bush, with Potential New Translational Frameshift within its Cluster | Mar 18, 2024 9:29 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Florida International University | Jaime Mayoral mayoralj@fiu.edu |
Genome Comparison of two Novel Viruses, Biscayne and Bush, Isolated from Microbacterium foliorum | Mar 18, 2024 9:34 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EA) |
Florida International University | Jaime Mayoral mayoralj@fiu.edu |
Isolation and Characterization Of the Novel Bacteriophage GreenIvy | Mar 18, 2024 9:53 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DJ) |
George Mason University | Anne Scherer aschere2@gmu.edu |
Isolation, Characterization, and Analysis of Bacteriophage Hortihabitatio | Mar 18, 2024 3:07 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster CT) |
George Mason University | Anne Scherer aschere2@gmu.edu |
Isolation, Characterization, and Analysis of Gordonia phage Typhonomachy | Mar 25, 2024 7:26 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DJ) |
Harford Community College | Breonna Martin brmartin@harford.edu |
Discovery and Characterization of Gordonia Phage Madvan | Mar 18, 2024 2:35 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster B) |
Howard University | Mary A Ayuk mary.ayuk@howard.edu |
Isolation and Characterization of B1 Bacteriophages: Dice, Olak, Orefu, Pacifista, Ricotta, and Selr12. | Mar 15, 2024 2:39 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EC) |
Illinois Wesleyan University | Rick Alvey ralvey@iwu.edu |
Miraculous Microbacterium Phages: The Discovery of Jollipop and Farmer Doug | Mar 20, 2024 1:55 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DV) |
Indiana University-Southeast | Elizabeth Rueschhoff erueschh@iu.edu |
DoobyDoo: a Gordonia siphovirus in the DV cluster | Mar 14, 2024 8:29 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Iowa State University | Nick Peters ntpeters@iastate.edu |
Phage hunting for Microbacterium foliorum | Apr 3, 2024 12:51 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Lehigh University | Margaret Kenna makg@lehigh.edu |
Investigating Mycobacteriophage Genomic Relationships and Immunity Patterns | Mar 18, 2024 2:09 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster P) |
LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Isolation and Genomic Characterization of Mycobacterium phage Pygmy | Mar 12, 2024 7:28 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Isolation and Characterization of Mycobacterium phage Astalavista | Mar 13, 2024 12:19 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Isolation and Characterization of Mycobacterium phage Jackal | Mar 21, 2024 1:27 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DJ) |
Metropolitan Community College | Bhaswati Manish bmanish@mccneb.edu |
CapTrips: Saga of discovering a putatively benevolent phage against the soil bacteria, Gordonia rubripertincta | Mar 18, 2024 2:25 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster DJ) |
Metropolitan Community College | Bhaswati Manish bmanish@mccneb.edu |
The World of Novel Phages Welcomes FortCran, a Bacteriophage with a Large Genome to be Annotated | Mar 18, 2024 2:30 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Montclair State University | Kirsten Monsen-Collar monsenk@mail.montclair.edu |
MiniBagel and Mooshroom: Two Novel Arthrobacter phage | Apr 10, 2024 8:47 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) (Cluster EB) |
Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Annotation of Three Actinobacteriophages: TukTuk, Shamu, and Megatron06 | Mar 15, 2024 4:50 p.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Nova Southeastern University | Katie Crump kcrump@nova.edu |
Genome Characterization and Annotation of Two Newly Discovered Bacteriophages MakoManhole and Penjamin420 | Mar 14, 2024 10:15 a.m. |
Summary Word Doc |
| Isolation and Genomic Characterization of New Phage(s) | Purdue University | Kari Clase kclase@purdue.edu |
Singers and Soda: The discovery and characterization of A. globiformis phages Pitbull, MissAmericana, RootBeer, DoctorPepper, and MellowYellow | Mar 18, 2024 3:38 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster DI) |
Queensborough Community College | Urszula Golebiewska ugolebiewska@qcc.cuny.edu |
Pimento a typical DI phage | Mar 18, 2024 2:42 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster AL) |
Southeastern Louisiana University | Justin Anderson justin.anderson-3@selu.edu |
Characterization of Arthrobacter phages BenchScraper (AY) and Kovu (AL) | Mar 13, 2024 5:06 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster FA) |
Southern Connecticut State University | Nicholas Edgington EdgingtonN1@SouthernCT.edu |
Characterization of a temperate Cluster FA phage 'Pucara' from the host Arthrobacter, and a lytic Cluster EF phage 'Snakehole' that infects Microbacterium foliorum. | Mar 18, 2024 10:24 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster Sing) |
Southern Maine Community College | Emily Savage esavage@smccme.edu |
Florida phage, Maine host: Genomic characterization of a singleton phage infecting a marine microbacterium | Mar 22, 2024 2:48 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Spelman College | James Melton jmelton@spelman.edu |
Genome sequencing of Arthrobacter globiformis and Gordonia rubripertincta phages using Nanopore and Illumina technologies | Mar 18, 2024 9:40 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster FA) |
Stevenson University | Rivka Glaser rglaser@stevenson.edu |
Isolation and Characterization of ChuckDuck, a Cluster FA phage | Mar 18, 2024 11:59 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster EC) |
Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Isolation and Characterization of Microbacteriophages Ganandorf and Godfather | Mar 14, 2024 4:35 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Universidad Autonoma de Sinaloa | Yesmi Ahumada yesmiahumada@uas.edu.mx |
Effect of environmental temperature, collection time, sampling depth, and isolation method on the detection of phages in soil from Culiacan, Sinaloa, Mexico | Mar 18, 2024 4:06 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster E) |
University of Hawaii at Manoa | Megan Porter mlporter@hawaii.edu |
Complete Genome Annotation of Actinobacteriophage Casino | Mar 15, 2024 10:44 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster CQ) |
University of Louisiana at Monroe | Ann Findley afindley@ulm.edu |
Annotation and Comparative Analysis of Gordonia phage Miskis (Cluster CQ) | Mar 19, 2024 12:25 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
AAA to the Rescue: Characterization of Novel A1 Phages Hermia, QTRlifeCrisis, and LilBib | Mar 17, 2024 2:13 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster K) |
University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
Pharb song: you’re K3, you’re lysogenic, and you’re plain. | Mar 17, 2024 2:21 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
What’s That Smell? Two Novel Mycobacteriophages Stink and Stank. | Mar 17, 2024 2:23 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
Characterization of a novel cluster MabC prophage genome discovered in the genome of pathogenic Mycobacterium chelonae isolate | Mar 17, 2024 2:26 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
Applejack, a Novel A1 Mycobacteriophage with Unique Genomic Characteristics | Mar 17, 2024 3:28 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster K) |
University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
The Duality of Double Agent Agent47 | Mar 17, 2024 3:32 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster K) |
University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
Unveiling Megsy: An Exploration of a Novel Phage Genome | Mar 17, 2024 3:38 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster F) |
University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
Unraveling the Mystery of novel Cluster F4 phage Lunastella | Mar 17, 2024 3:51 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster F) |
University of Maine, Honors College | Caitlin Wiafe-Kwakye caitlin.tetteh@maine.edu |
The Discovery of DosHalletts: An F1 Cluster Mycobacteriophage | Mar 18, 2024 5:56 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster E) |
University of Maine, Honors College | Caitlin Wiafe-Kwakye caitlin.tetteh@maine.edu |
Characterization of the mycobacteriophage Teaspoon, a unique cluster E phage. | Mar 18, 2024 6 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster B) |
University of Maine, Honors College | Caitlin Wiafe-Kwakye caitlin.tetteh@maine.edu |
Trash to Treasure: An Analysis of Cluster B1 Phage, Quisquiliae | Mar 18, 2024 6:03 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster BS) |
University of Maryland, Baltimore County | Steve Caruso scaruso@umbc.edu |
Characterization of Bacteriophage GiJojo: Insights into Genomic Relationships | Mar 16, 2024 1:40 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster BI) |
University of Maryland, Baltimore County | Steve Caruso scaruso@umbc.edu |
Genomic Characterization of the Novel Bacteriophage GoblinVoyage | Mar 17, 2024 8:50 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster BS) |
University of Maryland, Baltimore County | Steve Caruso scaruso@umbc.edu |
Genome Analysis of Streptomyces Bacteriophage GiJojo | Mar 18, 2024 11:14 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster EA) |
University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
Isolation and Characterization of Microbacteriophages KingJulien, NickSell, and StirfryIV | Mar 15, 2024 10:18 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster EG) |
University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
Isolation and Characterization of Microbacteriophages BirdInFrench and Wilca | Mar 15, 2024 10:30 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster B) |
University of Ottawa | Adam Rudner arudner@uottawa.ca |
Identifying the blank space in Streptomyces bacteriophages Superstar and Rideau | Mar 19, 2024 1:06 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of Ottawa | Adam Rudner arudner@uottawa.ca |
We’ve seen this film before: two more AZ cluster phages, Exile and AinMach, found in Ottawa. | Mar 19, 2024 1:45 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of Ottawa | Adam Rudner arudner@uottawa.ca |
Barbie’s Microscopic World: Characterization of Arthrobacter globiformis Bacteriophages BarbieDoll, Renaldo, and Zeina | Mar 19, 2024 1:56 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster A) |
University of Ottawa | Adam Rudner arudner@uottawa.ca |
Unraveling Uncommon Traits: Annotating Aikyam and Raqqa, Distinct AY Phages | Mar 19, 2024 2:14 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster C) |
University of South Florida | Richard Pollenz pollenz@usf.edu |
Analysis of a Unique Thymine Metabolic Pathway in the Genome of CT Cluster Phage MaVan | Mar 21, 2024 8:36 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster EA) |
University Paris-Saclay | Ombeline Rossier ombeline.rossier@universite-paris-saclay.fr |
So far and yet so near: what is an ocean for cluster EA phages infecting Microbacterium foliorum ? | Apr 4, 2024 4:07 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Virginia Tech | Stephanie Voshell svoshell@vt.edu |
Babyback and Silvy: A comparison of novel A2 and N cluster mycobacteriophages | Mar 18, 2024 9:59 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster E) |
Western Kentucky University | Rodney King rodney.king@wku.edu |
Discovery and Genomic Characterization of Bacteriophage BigBubba | Mar 18, 2024 10:13 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster E) |
Western Kentucky University | Rodney King rodney.king@wku.edu |
Discovery and Genomic Characterization of Bacteriophage Xandras | Mar 18, 2024 10:37 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Winthrop University | Kristi Westover westoverk@winthrop.edu |
Isolation, Characterization, and Initial Sequence Comparisons of 13 Soil Mycobacteriophages at Winthrop University | Mar 14, 2024 9:35 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster EH) |
Xavier University of Louisiana | Harris McFerrin hmcferri@xula.edu |
Discovery of Bacteriophage SuMoo and Annotation of its Genome | Mar 13, 2024 3:45 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster EE) |
Xavier University of Louisiana | Harris McFerrin hmcferri@xula.edu |
Discovery of Novel Bacteriophage SantasSleigh | Mar 13, 2024 3:05 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster EK) |
Xavier University of Louisiana | Harris McFerrin hmcferri@xula.edu |
The Discovery and Characterization of Bacteriophage Barroma | Mar 13, 2024 3:57 p.m. |
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| Other (Cluster E) |
Allegany College of Maryland | Steven Heninger sheninger@allegany.edu |
The Utilization of Phages to Treat Severe Acne | Mar 13, 2024 9:31 p.m. |
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| Other | College of St. Scholastica | Daniel Westholm dwesthol@css.edu |
Identification of cytotoxic genes in mycobacteriophage Brusacoram | Mar 19, 2024 10:57 p.m. |
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| Other (Cluster EA) |
Florida International University | Jaime Mayoral mayoralj@fiu.edu |
Exploration of Possible Translational Frameshifts in Phages of the EA5 Cluster | Mar 18, 2024 9:47 p.m. |
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| Other (Cluster E) |
University of Southern California | Nancy Castro ncastro@usc.edu |
The Characterization of Phage Clock Virion Tail Assembly Genes (EA5 Subcluster) | Mar 12, 2024 11:19 p.m. |
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| Other | Xavier University of Louisiana | Harris McFerrin hmcferri@xula.edu |
Exploring Bacteriophage Diversity: Insights from Louisiana University Environments | Mar 15, 2024 3:38 p.m. |
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| Troubleshooting and/or New Techniques (Cluster EE) |
Chatham University | Colleen Barrett c.barrett@chatham.edu |
Contamination of Microbacterium Cluster EE Phage in the Laboratory Setting | Mar 22, 2024 12:25 p.m. |
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| Troubleshooting and/or New Techniques (Cluster EE) |
Chatham University | Colleen Barrett c.barrett@chatham.edu |
Decontamination of Microbacterium Cluster EE Phage in the Laboratory Setting | Apr 1, 2024 1:45 p.m. |
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| Troubleshooting and/or New Techniques (Cluster EA) |
Drexel University | Alison Moyer aem442@drexel.edu |
There are no mistakes, only happy accidents: Deviation from phage amplification protocol yielded high titers of the novel Actinobacteriophage OldNelly (EA1) | Mar 18, 2024 8:29 p.m. |
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| Faculty-Presented Abstracts | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Advanced Bioinformatic Analysis (Cluster A) |
Coppin State University | Dondra Bailey dbailey@coppin.edu |
Complete genome Sequence of Mycobacterium smegmatis Phage Rummer, a Subcluster A3 Actinophage | Mar 22, 2024 11:26 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) (Cluster AS) |
Stevenson University | Rivka Glaser rglaser@stevenson.edu |
First dip in the SEA: Phage Discovery and Genome Annotation at Stevenson University | Mar 18, 2024 9 p.m. |
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| TA-Presented Abstracts | ||||
|---|---|---|---|---|
| Institution | Faculty Contact | Title | Last Modified | Files |
| Phage Gene Expression Studies (Cluster F) |
Danielle Heller hellerd@hhmi.org |
Exploring the cytotoxicity and essentiality of gene products encoded by F1 mycobacteriophage NormanBulbieJr | Mar 22, 2024 3:27 p.m. |
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| Phage Gene Expression Studies (Cluster N) |
Vassie Ware vcw0@lehigh.edu |
Exploring Cluster N Mycobacterium Prophage Genes Involved in Host Defenses | Mar 18, 2024 4:13 p.m. |
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| Phage Gene Expression Studies (Cluster Sing) |
Vassie Ware vcw0@lehigh.edu |
Analysis of Mycobacteriophage Kumao Gene Functions with the SEA-GENES Research Project at Lehigh University | Mar 18, 2024 4:28 p.m. |
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| Troubleshooting and/or New Techniques | Amanda Freise afreise@ucla.edu |
Development of a Multi-Host Enrichment Approach for Phage Isolation | Mar 18, 2024 6:06 p.m. |
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| Troubleshooting and/or New Techniques | Ann Findley afindley@ulm.edu |
Usefulness of Restriction Enzymes to Predict Cluster Assignments of Novel Gordonia Bacteriophages | Mar 19, 2024 12:26 p.m. |
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| Other | Jessica Rocheleau jmrocheleau@umass.edu |
The experiences of undergraduate teaching assistants in a large-scale implementation of Phage Discovery | Mar 15, 2024 10:26 a.m. |
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