Welcome to the forums at seaphages.org. Please feel free to ask any questions related to the SEA-PHAGES program. Any logged-in user may post new topics and reply to existing topics. If you'd like to see a new forum created, please contact us using our form or email us at info@seaphages.org.
Recent Activity
Ruth Plymale posted in Tenure track Microbiology faculty position at Ouachita Baptist University in Arkansas
bburnes posted in Calling start in FC phage Phrampa
cdshaffer posted in Calling start in FC phage Phrampa
bburnes posted in Calling start in FC phage Phrampa
Debbie Jacobs-Sera posted in Calling start in FC phage Phrampa
ParB-like nuclease domain
| Link to this post | posted 15 May, 2025 22:05 | |
|---|---|
|
Spec a C1 phage gene 115, start 65315-66115 has a strong match in HHPred to a parB family protein and to a ParB-like nuclease domain, but I noticed that function has been crossed out of the official function's list. The only option is that is a ParB-like dsDNA partitioning protein but only if it has the parA partner in the genome, correct? |
| Link to this post | posted 16 May, 2025 17:51 | |
|---|---|
|
Noe, look at line 65 in the approved function list (directly below the crossed out item). that hit is called a nuclease domain in the databases we use, but there is no nuclease function to that sequence. it is now named "ParB N-terminal-like domain" debbie |