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Debbie Jacobs-Sera posted in Validating Translational Frameshifts in DNA Master
storksle posted in Validating Translational Frameshifts in DNA Master
Debbie Jacobs-Sera posted in Validating Translational Frameshifts in DNA Master
Lee Hughes posted in Validating Translational Frameshifts in DNA Master
storksle posted in Validating Translational Frameshifts in DNA Master
VIP2 is not in all Cluster D genomes
| Link to this post | posted 15 Aug, 2018 23:46 | |
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I just looked at the genome of KandZ (Cluster D1). There is a VIP2 gene in that area in other phage genomes (Troll4_gp7). For reasons I have not yet investigated, gene 6 and 7 (in most of these genomes) are in the same pham (4561). But only the second gene hits VIP2 in HHPred. In addition, that second gene can be in a different pham (5921)that is not a VIP2. This true in KandZ. (posted 8-15-1
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