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uOttawaPHAGE posted in Fin anti-sigmaF factor
Debbie Jacobs-Sera posted in Weird domain distribution over "cytosine methyltransferase" hits in an AS3 phage
nic.vega posted in Weird domain distribution over "cytosine methyltransferase" hits in an AS3 phage
Debbie Jacobs-Sera posted in Weird domain distribution over "cytosine methyltransferase" hits in an AS3 phage
nic.vega posted in Weird domain distribution over "cytosine methyltransferase" hits in an AS3 phage
Membrane protein in DE phage
| Link to this post | posted 29 May, 2018 20:40 | |
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We are annotating Rofo. In a couple of related phages (Vivi2 and Lennon), homologs of genes 4 and 6 have been called membrane proteins. However, gp 4 has no predicted TMH, so mistake? gp 6 does have 1 TMH but its location - between terminase and portal - makes me think this function call is suspect. Any insights? |
| Link to this post | posted 30 May, 2018 17:23 | |
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sounds like 4 might be an error– but there isn't any rule about where membrane proteins are in the genome. so 6 can stand. |