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uOttawaPHAGE posted in Minor Tail protein or Hydrolase?
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Debbie Jacobs-Sera posted in when Glimmer and Genemark call genes in different strands
Phage Predator (H1) mis-annotation of lysin A gene?
| Link to this post | posted 19 Feb, 2021 00:45 | |
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Hello SEA-PHAGES team, Some students doing characterization of cluster H phages noticed an interesting discrepancy in the lysin A gene of Predator (cluster H1). Many other phages, including others in H1, have lysin A genes in pham 52459. Predator also has this pham, but the small orpham 17367 immediately upstream is the one that has been annotated as lysin A (see Pham Map photo). The orpham has no hits in NCBI BLAST. Could this be an annotation error? |
1.02Mb| Link to this post | posted 19 Feb, 2021 01:09 | |
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Yep. Looks like an error to me. We will get this corrected as we continue with genome curations. Thanks! debbie |
| Link to this post | posted 19 Feb, 2021 01:35 | |
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awesome! thanks, Debbie! |