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Debbie Jacobs-Sera posted in Help with Annotating Direct Terminal Repeats
Marie Fogarty posted in Help with Annotating Direct Terminal Repeats
cdshaffer posted in Help with Annotating Direct Terminal Repeats
Marie Fogarty posted in Help with Annotating Direct Terminal Repeats
Debbie Jacobs-Sera posted in Potential minor tail proteins in cluster GK
Phage Predator (H1) mis-annotation of lysin A gene?
| Link to this post | posted 19 Feb, 2021 00:45 | |
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Hello SEA-PHAGES team, Some students doing characterization of cluster H phages noticed an interesting discrepancy in the lysin A gene of Predator (cluster H1). Many other phages, including others in H1, have lysin A genes in pham 52459. Predator also has this pham, but the small orpham 17367 immediately upstream is the one that has been annotated as lysin A (see Pham Map photo). The orpham has no hits in NCBI BLAST. Could this be an annotation error? |
1.02Mb| Link to this post | posted 19 Feb, 2021 01:09 | |
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Yep. Looks like an error to me. We will get this corrected as we continue with genome curations. Thanks! debbie |
| Link to this post | posted 19 Feb, 2021 01:35 | |
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awesome! thanks, Debbie! |