Link to this post | posted 01 Oct, 2015 20:11
jparker	Hello! I'm trying to get Phamerator up and going for my phages using the 2015 VM. We will be annotating both mycobacteriophages and propionibacterio phages. For the myco' I have updated the Phamerator database, but don't see my new phages, even though it says they have been phamerated. Can you please post the server location and database names I should be using?

Link to this post | posted 05 Oct, 2015 14:00

DanRussell

Hi Jordan, Apologies, we haven't done a great job of letting everyone know the updated Phamerator settings. We've combined all of the Actinobacteria phages into a single Phamerator database. It is now available by using the following settings in Phamerator (go to Edit–>Preferences in Phamerator to change these values). Take care to type exactly, because these are all case-sensitive and must be input exactly as shown. Server: http://phamerator.webfactional.com/databases_Hatfull Database: Actino_Draft After entering both of these values, click "Force Database Update". Wait while Phamerator updates, then it'll prompt you to restart. Do that. If you're prompted for a password at any point, it should be simply: "phage". –Dan Edited 05 Oct, 2015 14:00

Link to this post | posted 20 Jan, 2016 22:44
ksaville	Hi I had the exact same question. I just forced an update (the settings were already as shown in Dan's post, but my phage still don't show up. I'm looking for timmi and briton15 Ken

Link to this post | posted 20 Jan, 2016 22:47
ksaville	hmm I think I didn't restart phamerator correctly it's downloading updates now

Link to this post | posted 20 Jan, 2016 22:51
ksaville	yep - it showed up now. I found Timmi and he wasn't trapped in a well. Thanks

Link to this post | posted 21 Jan, 2016 03:55
DanRussell	ksaville yep - it showed up now. I found Timmi and he wasn't trapped in a well. Thanks I never understood why Timmi was so interested in playing near wells all the time. Glad to hear he's safe and you've figured out the Phamerator issue! –Dan