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Recent Activity
nietof posted in ParB-like nuclease domain
Jeremy Garza posted in Phage Staining - Uranyl Acetate
Debbie Jacobs-Sera posted in Help with Annotating Direct Terminal Repeats
Marie Fogarty posted in Help with Annotating Direct Terminal Repeats
cdshaffer posted in Help with Annotating Direct Terminal Repeats
Gene or no gene?
| Link to this post | posted 27 Apr, 2023 14:04 | |
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We have been examining gaps in phage Culver, right near quite a few tRNAs. In one region, we find a decently long ORF(165bp). There is a smidge of CP, but very little. There is one BLAST match with Phage WilliamBoone. Should we call it? I attached an image that has a bunch of information on the gene. Thank you for any advice! |
92Kb| Link to this post | posted 27 Apr, 2023 15:43 | |
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Hi Ellen, I do not see any coding potential in this area. I would not call a gene there. Also remember that the red dotted lines of coding potential are not a good indicator of coding potential. (The represent patterns of 2 nucleotides (which is very noisy). best, debbie |