SEA-PHAGES Logo

The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

Welcome to the forums at seaphages.org. Please feel free to ask any questions related to the SEA-PHAGES program. Any logged-in user may post new topics and reply to existing topics. If you'd like to see a new forum created, please contact us using our form or email us at info@seaphages.org.

Trimming a tRNA only called by tRNA scan-SE

| posted 26 Apr, 2023 14:33
In phage Culver (CQ1) we are trying to trim a tRNA that has only been called by tRNA Scan. I inluded all of the evidence related to this to the attachment. Can you take a look and let us know how exactly we determine where it should be trimmed? It does not have the sequence CCA.

Thank you,
Ellen
| posted 26 Apr, 2023 20:29
Ellen,
I agree with your decision of where to cut.
Well done!

It is not a very pretty tRNA, but I think it should be called.
debbie
| posted 27 Apr, 2023 14:13
Thank you!
| posted 27 Apr, 2023 14:13
Thank you!
 
Login to post a reply.