SEA-PHAGES Videos
Channels
Tutorials (56 videos) Go to channel page
How-to videos that help with various parts of running or participating in a SEA-PHAGES course.
Subchannels
Genome Annotation (24 videos) Go to channel page
Tutorials that describe how to annotate a phage genome.
Subchannels
DNA Master (15 videos) Go to channel page
Tutorials that demonstrate how to use DNA Master to create high-quality phage genome annotations.
Videos
Data Collection and Interpretation (9 videos) Go to channel page
Tutorials on how to collect and interpret data that is essential to produce a high-quality genome annotation.
Videos
Phage Discovery: Overview (10 videos) Go to channel page
Videos that provide overviews for the various stages of Phage Discovery
Videos
Phage Discovery: Protocols (8 videos) Go to channel page
Tutorials for the basic wet-lab work of discovering phages.
Videos
Phage Discovery Prep Guide (5 videos) Go to channel page
Tutorials for the basic preparation of reagents and cultures for Phage Discovery.
Videos
Comparative Genomics (6 videos) Go to channel page
Videos that demonstrate several ways to use comparative genomes to analyze groups of phage genomes.
Videos
Assembly and QC (1 video) Go to channel page
Tutorials that demonstrate how to assemble and finish phage genomes after they've been sequenced.
Videos
Classroom Tools (1 video) Go to channel page
Tutorials for various tools that can be used in a SEA-PHAGES classroom.
Videos
Genome Announcements (1 video) Go to channel page
Tutorials designed to help write high-quality papers for the journal Genome Announcements.
Videos
2015 Symposium (20 videos) Go to channel page
Videos from the 7th Annual SEA-PHAGES Symposium, held at Janelia Research Campus in Ashburn, Virginia.
Videos
Subchannels
2015 Student Talks (18 videos) Go to channel page
The student talks from the 2015 Symposium.
Videos
Assessment (2 videos) Go to channel page
Videos related to measuring the SEA-PHAGES program's impact on students.
Videos
All Videos
DNA Master: Minimal File Formatting
This video demonstrates how to make a "minimal" DNA Master file to submit for QC and upload to GenBank.
Added: Jun 18, 2020
Essential Functions and Cluster-Specific Forums
This video showcases the functions that must be found in all phage genome annotations as well as the cluster-specific annotation forums.
Added: Jun 18, 2020
Interpreting GeneMarkS Output
This video demonstrates how to look at the graphical output after running GeneMarkS and using it to understand coding potential and call genes.
Added: Jun 18, 2020