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All posts created by jrocheleau

| posted 16 Sep, 2024 13:46
Just wondering if phamerator is currently down - I haven't been able to access it all morning. It says 'this site can't be reached.'
Posted in: PhameratorPhamerator down?
| posted 03 Nov, 2021 19:04
Hi folks,

We're annotating a singleton Microbacteriophage PineapplePizza, and have found 2 genes (gp 10 and 11) that have good BLAST and HHPred hits to upper collar and lower collar proteins. The BLAST hits are from Arthrobacter phages Mendel and Anjali, which have these functions listed in Genbank, however the upper collar and lower collar proteins are not on the official function list. Should they be?

Thanks so much,
Jess
Posted in: Functional AnnotationUpper and lower collar proteins