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Recent Activity
Databases and Alternate hosts
Link to this post | posted 01 Oct, 2015 20:11 | |
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Hello! I'm trying to get Phamerator up and going for my phages using the 2015 VM. We will be annotating both mycobacteriophages and propionibacterio phages. For the myco' I have updated the Phamerator database, but don't see my new phages, even though it says they have been phamerated. Can you please post the server location and database names I should be using? |
Link to this post | posted 05 Oct, 2015 14:00 | |
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Hi Jordan, Apologies, we haven't done a great job of letting everyone know the updated Phamerator settings. We've combined all of the Actinobacteria phages into a single Phamerator database. It is now available by using the following settings in Phamerator (go to Edit–>Preferences in Phamerator to change these values). Take care to type exactly, because these are all case-sensitive and must be input exactly as shown. Server: http://phamerator.webfactional.com/databases_Hatfull Database: Actino_Draft After entering both of these values, click "Force Database Update". Wait while Phamerator updates, then it'll prompt you to restart. Do that. If you're prompted for a password at any point, it should be simply: "phage". –Dan |
Link to this post | posted 20 Jan, 2016 22:44 | |
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Hi I had the exact same question. I just forced an update (the settings were already as shown in Dan's post, but my phage still don't show up. I'm looking for timmi and briton15 Ken |
Link to this post | posted 20 Jan, 2016 22:47 | |
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hmm I think I didn't restart phamerator correctly it's downloading updates now |
Link to this post | posted 20 Jan, 2016 22:51 | |
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yep - it showed up now. I found Timmi and he wasn't trapped in a well. Thanks |
Link to this post | posted 21 Jan, 2016 03:55 | |
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ksaville I never understood why Timmi was so interested in playing near wells all the time. Glad to hear he's safe and you've figured out the Phamerator issue! –Dan |