Abstracts for the 2023 SEA Symposium
This meeting has 158 associated abstracts.
| Student-Presented Abstracts, Consider For Talks | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Advanced Bioinformatic Analysis | James Madison University | Steven Cresawn cresawsg@jmu.edu |
Exploring the Role of tRNA Genes in Mycobacteriophages | Mar 20, 2023 12:44 p.m. |
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| Advanced Bioinformatic Analysis | Kansas State University | Christopher Herren cdherren@ksu.edu |
Flint Hills Phages - Phylogenetic Characterization of Lysogeny-Related Genes of Crater and Other Bacteriophages | Apr 18, 2023 10:56 a.m. |
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| Advanced Bioinformatic Analysis | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Comparative Genomic and Phylogenetic Analysis of Cluster A Mycobacteriophages | Mar 28, 2023 1:53 p.m. |
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| Advanced Bioinformatic Analysis | SUNY Old Westbury | Christos Noutsos noutsosc@oldwestbury.edu |
Evolution rates of actinobacteria viruses' genes in the DB cluster | Mar 14, 2023 8:16 p.m. |
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| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Efficient and Accessible Analysis of Phage Genomes with Helper Functions: A Web-Based Suite of Tools | Mar 20, 2023 7:14 p.m. |
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| Phage Gene Expression Studies | Coastal Carolina University | Daniel Williams dwilliams@coastal.edu |
Systematic Characterization of Mycobacteriophage Phayonce Gene Function on Growth of Mycobacterium Smegmatis | Mar 21, 2023 9:15 p.m. |
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| Phage Gene Expression Studies | La Sierra University | Arturo Diaz adiaz@lasierra.edu |
Identification of 34 genes from phage Lebron that are toxic upon overexpression in Mycobacterium smegmatis | Mar 20, 2023 4:19 p.m. |
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| Phage Gene Expression Studies | University of South Florida | Richard Pollenz pollenz@usf.edu |
Phenotypic Analysis of Genes from the F2 Cluster Phage Avani | Mar 20, 2023 5:45 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Austin Community College | Kissaou Tchedre kissaou.tchedre@austincc.edu |
Identification of the Bacteriophage EastView910 | Mar 17, 2023 4:34 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Austin Peay State University | Sergei Markov markovs@apsu.edu |
Isolation and genome annotation of two new bacteriophages, DumpQuist and ChikPic | Mar 6, 2023 1:37 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Baylor University | Tammy Adair tamarah_adair@baylor.edu |
Discovery and Identification of Lakshmi Bacteriophage from Plano, Texas | Mar 27, 2023 5:33 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Baylor University | Tammy Adair tamarah_adair@baylor.edu |
Discovery, Characterization, and Analysis of Novel Arthrobacter Phage Wildwest | Mar 27, 2023 5:42 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Isolation and Genomic Summary of Bacillus megaterium phage Brahmus | Apr 5, 2023 12:58 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
Isolation and Genomic Analysis of Bacillus megaterium Phage 614 | Apr 5, 2023 1:01 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Calvin University | Randy DeJong rdejong@calvin.edu |
Phun for the Whole Orphamily: exploring Rhodococcus equi phages | Mar 22, 2023 2:53 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | College of William & Mary | Margaret Saha mssaha@wm.edu |
Characterization of Discoknowium, A Novel A5 Phage | Mar 15, 2023 7:28 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | College of William & Mary | Margaret Saha mssaha@wm.edu |
Analysis of StubbySaigey and its Place in the Conserved C1 Cluster | Mar 15, 2023 7:40 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Culver-Stockton College | Sarah Reardon sreardon@culver.edu |
Annotation of Mycobacteriophage Hashrod | Mar 17, 2023 1:52 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | George Mason University | Bonnie Madden BMadden1@gmu.edu |
Characterization of Gordonia rubripertincta bacteriophage with Myoviridae morphology | Mar 21, 2023 4:10 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | La Sierra University | Arturo Diaz adiaz@lasierra.edu |
Bioinformatics analysis of the endolysins and holin-like membrane proteins in Cluster EB phages | Apr 10, 2023 11:24 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Lee University | Joseph Daft jdaft@leeuniversity.edu |
Isolation and Characterization of the Novel Phage Schimmels22 | Mar 21, 2023 3:16 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Miami University | Mitchell Balish balishmf@miamioh.edu |
Interesting Genes in Moleficent, a New EK2 Subcluster Phage of Microbacterium foliorum | Mar 20, 2023 10:33 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | New Mexico Institute of Mining and Technology | Linda DeVeaux linda.deveaux@nmt.edu |
Genomic Analysis of Novel Desert Soil Bacteriophages: Mossy and Erutan | Mar 21, 2023 3:45 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | New Mexico Institute of Mining and Technology | Linda DeVeaux linda.deveaux@nmt.edu |
A Microbiological Analysis of Desert Soil Bacteriophages: Lysis to Kill | Mar 21, 2023 3:48 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Nova Southeastern University | Katie Crump kcrump@nova.edu |
Decoding Phages: Complete Genome Sequence Analysis of Two Novel Bacteriophages, Alyssamiracle and Fribs8 | Mar 16, 2023 11:02 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Queensborough Community College | Urszula Golebiewska ugolebiewska@qcc.cuny.edu |
Genomic Analysis of Rhodococcus erythropolis bacteriophage Trogglehumper | Mar 17, 2023 8:53 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Queensborough Community College | Urszula Golebiewska ugolebiewska@qcc.cuny.edu |
Genomic Analysis of Gordonia rubripertincta bacteriophage Sampudon | Mar 19, 2023 5:25 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Saint Joseph's University | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
It's About Damn Time to make a Phylogenetic Tree for the Lizzo Phage | Mar 20, 2023 2:12 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Saint Joseph's University | Julia Lee-Soety jlee04@sju.edu |
Discovering and Characterizing Mycobacteriophages Scrick (cluster B1) and Mudslide (cluster B4) at SJU. | Mar 21, 2023 6:02 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | SUNY Old Westbury | Fernando Nieto nietof@oldwestbury.edu |
Mycobacteriophage Isolation and Characterization from local soils in Long Island | Mar 15, 2023 6:26 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Universidad Ana G. Mendez, Gurabo campus | Catalina Dávila davilac2@uagm.edu |
Asta and Agente005: two newly tropical bacteriophages found in Puerto Rico | Mar 21, 2023 10:54 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Universidad Nacional de Rosario | Alejandra Mussi mussi@cefobi-conicet.gov.ar |
“Unveiling the diversity of bacteriophages in the Pampean region of Argentina” | Apr 4, 2023 1:52 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Central Oklahoma | Hari Kotturi hkotturi@uco.edu |
Discovery and Characterization of Microbacterium paraoxydansNWU1 bacteriophage Bacbegone | Mar 15, 2023 10:45 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Central Oklahoma | Hari Kotturi hkotturi@uco.edu |
Isolation and characterization of Microbacterium paraoxydansNWU1 phage: Dr. Worm | Mar 15, 2023 10:48 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Annotation and characterization of Gordonia bacteriophage Salvador | Mar 16, 2023 10:14 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Ibadan | Olubusuyi Moses Adewumi adewumi1@hotmail.com |
Computational Analysis of Microbacterium Bacteriophage Bianmat Genome | Mar 16, 2023 11:19 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of North Texas | Lee Hughes lhughes@unt.edu |
Isolation, Characterization, and Genome Annotation of North Texas Streptomyces bicolor bacteriophages Dexers, Marav, Provolone, and SheRa | Mar 21, 2023 7:12 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of North Texas | Lee Hughes lhughes@unt.edu |
The Discovery and Genome Annotation of the New Streptomyces griseus Bacteriophages: Bogota and Kenrey | Mar 21, 2023 7:27 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of South Florida | Richard Pollenz pollenz@usf.edu |
Annotation of Azira a CT cluster phage that infects G. rubripertincta | Mar 20, 2023 2:36 p.m. |
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| Phage Host Range and/or Lysogeny Testing | Brigham Young University | Julianne Grose julianne_grose@byu.edu |
The Broad Host Range of Bacillus megaterium phages 614, 617, 619, 633 and 634. | Apr 5, 2023 12:51 a.m. |
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| Other | Lehigh University | Vassie Ware vcw0@lehigh.edu |
SEA Explorations in an Advanced Phage Genetics Course at Lehigh University | Mar 15, 2023 10:14 p.m. |
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| Other | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Comparative Analysis of Cluster M Actinobacteriophage Minor Tail Protein Phamilies | Mar 28, 2023 10:40 a.m. |
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| Other | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
The Potential of Mycobacteriophage MazG Pyrophosphohydrolases as Medical Therapy Enhancers | Mar 28, 2023 7:13 p.m. |
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| Other | University of Ottawa | Adam Rudner arudner@uottawa.ca |
uOttawa PhageHunters Unite: Discovering Defense Escape Mutants Who Outsmart Actinobacteria | Mar 26, 2023 5:26 p.m. |
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| Troubleshooting and/or New Techniques | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Lessons Learned and Tips for Improved Genome Annotation Following a Comparative Look at Gene Calls in Mycobacteriophage Subcluster M1 Over the Years 2009-2022 | Mar 28, 2023 10:20 a.m. |
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| Troubleshooting and/or New Techniques | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Comparative Analysis of the Reliability of Six Bioinformatics Software for Topological Prediction of Bacteriophage Membrane Proteins | Mar 28, 2023 7:04 p.m. |
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| Troubleshooting and/or New Techniques | McGill University | Patrick Lypaczewski patrick.lypaczewski@mcgill.ca |
Discovery of a Potentially New Gene Function in Bacteriophages | Mar 21, 2023 11:40 a.m. |
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| Troubleshooting and/or New Techniques | New York Institute of Technology | Bryan Gibb bgibb@nyit.edu |
Phage Argan: A case study comparing Illumina and Nanopore sequencing of bacteriophage genomes | Mar 21, 2023 11:14 p.m. |
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| Student-Presented Abstracts, DO NOT Consider For Talks | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Advanced Bioinformatic Analysis | James Madison University | Steven Cresawn cresawsg@jmu.edu |
A Comparative Analysis of Protein and Domain Conservation within Cluster Q Genomes | Mar 21, 2023 6:28 p.m. |
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| Advanced Bioinformatic Analysis | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Codon Usage Bias: What do Subcluster M1 Mycobacteriophages Glaske16 and Dimiminus Contribute to the Story? | Mar 28, 2023 11:41 a.m. |
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| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Novel Arthrobacter sulfureus phage Emotion shares greatest structural gene similarity to Arthrobacter AZ cluster phages | Mar 21, 2023 10:29 p.m. |
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| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Investigating Tail Proteins of Phages That Infect Gordonia terrae 3612 | Mar 21, 2023 10:38 p.m. |
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| Advanced Bioinformatic Analysis | University of California, Los Angeles | Tejas Bouklas tbouklas@mednet.ucla.edu |
A Relational Analysis of Rhodococcus Phage Clusters and Singletons | Mar 21, 2023 10:43 p.m. |
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| Advanced Bioinformatic Analysis | University of California, Los Angeles | Amanda Freise afreise@ucla.edu |
Characterization of Genomic Diversity In Bacteriophages Infecting Rhodococcus | Mar 21, 2023 10:53 p.m. |
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| Advanced Bioinformatic Analysis | University of California, Los Angeles | Tejas Bouklas tbouklas@mednet.ucla.edu |
Cross-Genera Transmission in Low GC Content Mycobacteriophages | Mar 21, 2023 10:56 p.m. |
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| Advanced Bioinformatic Analysis | University of California, Los Angeles | Tejas Bouklas tbouklas@mednet.ucla.edu |
A Comparative Analysis Between Arthrobacter and Microbacterium Phages Reveals Their Close Genomic Relationships | Mar 21, 2023 11:04 p.m. |
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| Advanced Bioinformatic Analysis | University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
Spatial influence on gene conservation across UMass Amherst Phages | Mar 21, 2023 9:35 a.m. |
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| Advanced Bioinformatic Analysis | University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
Bacteriophages possessing Cas4 family exonucleases infect hosts with primarily type I CRISPR immunity | Mar 21, 2023 9:40 a.m. |
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| Advanced Bioinformatic Analysis | University of Massachusetts Amherst | Jessica Rocheleau jmrocheleau@umass.edu |
Comparing Tail Assembly Chaperone Composition within and between Bacteriophage Morphotypes | Mar 21, 2023 9:47 a.m. |
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| Advanced Bioinformatic Analysis | University of Puerto Rico at Cayey | Edwin Vazquez edwin.vazquez4@upr.edu |
Genomic Comparison of Novel Microbacterium foliorum Bacteriophages Isolated from Tropical Soils in Puerto Rico | Mar 21, 2023 4:25 p.m. |
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| Advanced Bioinformatic Analysis | Western Kentucky University | Chandrakanth Emani chandrakanth.emani@wku.edu |
Characteristics of Mycobacteriophage Nergal and TiniBug | Mar 21, 2023 7:31 p.m. |
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| Advanced Bioinformatic Analysis | Western Kentucky University | Chandrakanth Emani chandrakanth.emani@wku.edu |
Characteristics of Mycobacteriophage Radiance and LunaBlu | Mar 21, 2023 7:32 p.m. |
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| Advanced Bioinformatic Analysis | Western Kentucky University | Chandrakanth Emani chandrakanth.emani@wku.edu |
Characteristics of Mycobacteriophage TruffulaTree and Holt | Mar 21, 2023 7:39 p.m. |
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| Advanced Bioinformatic Analysis | Western Kentucky University | Chandrakanth Emani chandrakanth.emani@wku.edu |
Characteristics of Mycobacteriophage Eurydice and Paraselene | Mar 21, 2023 7:47 p.m. |
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| Phage Gene Expression Studies | Coastal Carolina University | Daniel Williams dwilliams@coastal.edu |
Systematic Analysis of Bacteriophage Phayonce Gene Toxicity on Host Mycobacterium smegmatis | Mar 21, 2023 9:20 p.m. |
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| Phage Gene Expression Studies | College of St. Scholastica | Daniel Westholm dwesthol@css.edu |
Determination of gene function in mycobacteriophage Brusacoram | Mar 21, 2023 7:37 p.m. |
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| Phage Gene Expression Studies | Durham Technical Community College | Catherine Ward wardc@durhamtech.edu |
Examining Mycobacteriophage Gene Functions and Modulation of Bacterial Host Phenotypes | Mar 21, 2023 8:40 p.m. |
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| Phage Gene Expression Studies | Durham Technical Community College | Catherine Ward wardc@durhamtech.edu |
The Process of Discovering Mabel Gene Functions | Mar 21, 2023 8:55 p.m. |
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| Phage Gene Expression Studies | Durham Technical Community College | Catherine Ward wardc@durhamtech.edu |
Investigation of the Function of Five Novel Viral Genes | Mar 21, 2023 9:04 p.m. |
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| Phage Gene Expression Studies | Lehigh University | Michael Kuchka mrk5@lehigh.edu |
Elucidating the Function of the gp61 Protein of Mycobacteriophage Butters | Mar 15, 2023 1:55 p.m. |
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| Phage Gene Expression Studies | Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Using a Genetic Screen to Discover Gene Functions in Mycobacteriophages Sbash and Island3 | Mar 18, 2023 1:04 p.m. |
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| Phage Gene Expression Studies | Saint Leo University | Iain Duffy iain.duffy@saintleo.edu |
How many cytotoxicity tests does it take to get to the center of the TootsiePop phage? | Mar 21, 2023 8:40 p.m. |
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| Phage Gene Expression Studies | SUNY Old Westbury | Jillian Nissen nissenj@oldwestbury.edu |
Investigating gene functions in the F1 cluster phage Akhila | Mar 20, 2023 11:07 a.m. |
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| Phage Gene Expression Studies | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Modulation of Bacterial Host Phenotypes by Mycobacteriophage Pixie Gene Products | Mar 21, 2023 2:42 p.m. |
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| Phage Gene Expression Studies | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Exploring gene function in the Mycobacteriophage Bromden | Apr 4, 2023 6 p.m. |
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| Phage Gene Expression Studies | Winthrop University | Victoria Frost frostv@winthrop.edu |
Characterizing the Effect of Bacteriophage ExplosioNervosa Gene Expression on Mycobacterium smegmatis | Mar 13, 2023 2:49 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Albany College of Pharmacy and Health Sciences | Pradeepa Jayachandran pradeepa.jayachandran@acphs.edu |
The Analysis of the Genome of Bacteriophage: NorManre | Mar 20, 2023 11:36 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Allegany College of Maryland | Steven Heninger sheninger@allegany.edu |
The Identification and Role of tRNA in Rona | Mar 21, 2023 9:17 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Carthage College | Deb Tobiason dtobiason@carthage.edu |
Temperate or not? Isolation and characterization of two cluster EA1 phages that lack integrase yet produce lysogens. | Mar 15, 2023 3:03 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Case Western Reserve University | Rob Ward rew130@case.edu |
Isolation, characterization and initial sequence comparisons of bacteriophages capable of infecting Azotobacter vinelandii | Mar 21, 2023 5:09 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Chatham University | Colleen Barrett c.barrett@chatham.edu |
Microbacterium Cluster EE Phages Are Highly Conserved with Widespread Geographic Distribution | Mar 22, 2023 1:51 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Coastal Carolina University | Daniel Williams dwilliams@coastal.edu |
Discovery and Characterization of Three Phages at Coastal Carolina University | Mar 21, 2023 9:44 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | College of Charleston | Christine Byrum byrumc@cofc.edu |
Genome Annotation of Nicole72, a Microbacteriophage Isolated from Empty Flower Beds in Pittsburgh, Pennsylvania | Mar 21, 2023 11:48 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | College of Southern Nevada | Erin Windsor erin.windsor@csn.edu |
Analysis of Novel Gordonia rubripertincta bacteriophages Nibbles and Olgasclover | Mar 21, 2023 7:14 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | College of St. Scholastica | Daniel Westholm dwesthol@css.edu |
Genomic Characterization of Cluster E Mycobacteriophages Highbury and Saints25 | Mar 21, 2023 5:47 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Colorado State University-Pueblo | Amaya Garcia Costas amaya.garciacostas@csupueblo.edu |
Isolation of bacteriophage from soils that have experienced wildland fires | Mar 27, 2023 11:20 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Columbia State Community College | Elvira Eivazova eeivazova@columbiastate.edu |
Microbacteriophage Magritte: analysis of a new singleton | Apr 11, 2023 3:09 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Doane University | Erin Doyle erin.doyle@doane.edu |
Annotation of Gordonia terrae Phage ClamChowder in the DC1 Subcluster | Apr 4, 2023 2:52 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Drexel University | Alison Moyer aem442@drexel.edu |
M is for Methods, Membrane proteins and Manipulation of Microbacterium foliorum phages | Mar 21, 2023 9:13 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Durham Technical Community College | Marie Fogarty fogartym@durhamtech.edu |
Let’s Phage it: Deconvoluting Bacteriophage Genomes with DOGEMS and Annotating Morgana | Apr 6, 2023 2:35 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Eastern Nazarene College | Robert Logan robert.logan@enc.edu |
The discovery and characterization of two novel phages: ASegato and Dejavu | Mar 21, 2023 9:14 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Franklin Pierce University | Shallee Page pages@franklinpierce.edu |
Complete Genome Annotation of Gordonia bacteriophage Halo3 | Mar 20, 2023 2:15 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Harford Community College | Breonna Martin brmartin@harford.edu |
The speed eater: analysis and genome annotation of bacteriophage Hermeonysus | Mar 18, 2023 12:12 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Hope College | Joseph Stukey stukey@hope.edu |
Isolation and Genomic Analysis of the new F1 Mycobacteriophage Stap | Mar 21, 2023 10:19 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Howard University | Mary A Ayuk mary.ayuk@howard.edu |
Discovering Aikoy | Mar 22, 2023 1:56 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Howard University | Mary A Ayuk mary.ayuk@howard.edu |
Phage Gamgam, Isolation and Characterization from a soil sample collected from the Howard University campus | Mar 22, 2023 2:59 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Howard University | Mary A Ayuk mary.ayuk@howard.edu |
Isolation and characterization of subcluster B1 bacteriophages Simielle, DelRivs, Nyala, and Lumine. | Mar 15, 2023 9:23 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Howard University | Mary A Ayuk mary.ayuk@howard.edu |
Identifying and Characterizing Bacteriophages: Deenasa and Devonte | Mar 16, 2023 12:19 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Illinois Wesleyan University | Rick Alvey ralvey@iwu.edu |
The 18 new bacteriophages of the 22-23 IWU SEA Phages Class! | Mar 21, 2023 9:37 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Indiana University-Southeast | Elizabeth Rueschhoff erueschh@iu.edu |
Soos: A novel Gordonia rupripertincta bacteriophage in the CP Cluster | Mar 21, 2023 3:16 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Iowa State University | Nick Peters ntpeters@iastate.edu |
A comparison of RunningBrook to other phage that infect Microbacterium foliorum | Apr 5, 2023 12:23 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Lehigh University | Margaret Kenna makg@lehigh.edu |
Investigating Mycobacteriophage Genomic Relationships and Immunity Patterns | Mar 18, 2023 4:04 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Isolation and Characterization of a Novel Subcluster M1 Mycobacterium Phage Glaske16 | Mar 28, 2023 10:55 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Characterization of Eight Mycobacteriophages Isolated in East Texas During 2021-2022 | Mar 28, 2023 11:31 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
Isolation and Genomic Characterization of Mycobacterium Phage Mikedrop | Apr 4, 2023 11:49 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | McGill University | Patrick Lypaczewski patrick.lypaczewski@mcgill.ca |
Complete genome annotation of new bacteriophage Lewando: Navigating challenges with cluster-specific features | Apr 1, 2023 11:13 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Merrimack College | Charlotte Berkes berkesc@merrimack.edu |
Isolation and Characterization of Mycobacteriophage Milcery | Mar 21, 2023 7:32 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Montclair State University | Kirsten Monsen-Collar monsenk@mail.montclair.edu |
Amavida, Heylee, and JaNo: Three Novel Arthrobacter phage | Mar 17, 2023 3:11 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Northwestern College | Sara Tolsma stolsma@nwciowa.edu |
Discovery and Annotation of Two Phages that Infect Microbacterium foliorum: Tedro and BAjuniper | Mar 20, 2023 1:21 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Saint Joseph's University | C. Nicole (Nikki) Sunnen csunnen@sju.edu |
You're Up For Promotion, Commandaria! | Mar 20, 2023 2:13 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Saint Leo University | Iain Duffy iain.duffy@saintleo.edu |
Phages Unveiled: An Investigation into the Diversity of Newly Discovered Saint Leo Actinobacteriophages | Mar 21, 2023 8:21 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Salem State University | Amy Sprenkle asprenkle@salemstate.edu |
Discovery and Annotation of Microbacterium foliorum Actinobacteriophages and Statistical Analysis of the Percentage of Genes with No Known Function across the E Cluster. | Mar 21, 2023 4:44 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Southern Connecticut State University | Nicholas Edgington EdgingtonN1@SouthernCT.edu |
Annotation of the Cluster AZ temperate Arthobacter phages, JStan and Community: a truncated orpham, a possible secret TA system, and an analysis of predicted membrane proteins | Mar 21, 2023 10:55 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Southern Maine Community College | Emily Savage esavage@smccme.edu |
Using Environmental DNA (eDNA) to Detect Cluster EE Phages in Marine Environments | Mar 21, 2023 8:46 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Tarleton State University | Dustin Edwards dcedwards@tarleton.edu |
Characterization of Arthrobacteriophage MrAaronian | Mar 21, 2023 2:25 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Thiel College | Mary O'Donnell mgemmel-odonnell@thiel.edu |
Annotating Bacteriophages Altheas and Romm at Thiel College | Mar 15, 2023 12:06 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Colorado Boulder | Christy Fillman christy.fillman@Colorado.EDU |
Identifying the Unique Lysogenic Machinery In Cluster M Mycobacteriophage Auspice | Apr 3, 2023 12:26 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Detroit Mercy | Jacob Kagey kageyja@udmercy.edu |
The isolation and annotation of the B1 phage PhatLouie | Mar 21, 2023 10:44 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Evansville | Joyce Stamm joycestamm@twc.com |
Phinding Phredrick: The Importance of Manual Annotation in Finding Phage Genomes | Mar 21, 2023 12:53 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Evansville | Joyce Stamm joycestamm@twc.com |
Spelling out Spelly: The Manual Annotating of Spelly | Mar 21, 2023 1:01 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Louisiana at Monroe | Ann Findley afindley@ulm.edu |
Annotation and Comparative Analysis of Gordonia phages Arti (Cluster CR2) and MossRose (Cluster DR) | Mar 21, 2023 5:55 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
Exploring the gene content of novel prophages identified in genomes of pathogenic non-tuberculosis mycobacteria | Mar 14, 2023 12:50 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
Not Like Other Phage - Budski - a Diverse and Puzzling Gordonia Bacteriophage | Mar 14, 2023 2:03 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
No lysogeny here: the strictly lytic lifestyle of bacteriophage Horseradish | Mar 14, 2023 1:03 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
The ParABs and Cs of novel A15 Gordonia phage Nebulosus | Mar 14, 2023 1:06 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Sally Molloy sally.dixon@maine.edu |
Novel Gordonia phage Yummy: a delicious little virus | Mar 14, 2023 1:10 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
Outis: The Serial Bacterial Killer | Mar 14, 2023 1:54 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maine, Honors College | Melody Neely melody.neely@maine.edu |
A Tale of Two Integrases: Genome Annotation of Novel Bacteriophage SavBucketDawg | Mar 14, 2023 1:51 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maryland, Baltimore County | Steve Caruso scaruso@umbc.edu |
Physical and Genomic Characterization of Bacteriophage SoJo Isolated Using Host Bacteria Streptomyces mirabilis | Mar 17, 2023 9:51 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Maryland, Baltimore County | Steve Caruso scaruso@umbc.edu |
Isolation, Characterization, and Genome Annotation of the Novel Streptomyces Bacteriophage Patelgo | Mar 17, 2023 3:33 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Nebraska-Lincoln | Catherine Chia cchia1@unl.edu |
Isolation of phage that infect Gordonia rubripertincta and annotation of Fulcrum | Mar 21, 2023 12:45 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Host Range of Celery, a BD3 Bacteriophage that Infects Streptomyces coelicolor. | Mar 30, 2023 10:11 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Characterization and annotation of unique EM cluster bacteriophage Kikiko | Mar 30, 2023 10:30 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Exploring the Characteristics of Bacteriophage Simpson | Mar 30, 2023 10:39 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Ottawa | Adam Rudner arudner@uottawa.ca |
Now that’s the Tea on Oksu | Mar 30, 2023 11:11 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Ottawa | Adam Rudner arudner@uottawa.ca |
A Search for the Elusive Zymophage | Mar 30, 2023 11:43 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Pittsburgh | Sarah J. Swerdlow sjs308@pitt.edu |
Discovery of Gordonia terrae, Actinobacteriophages, Phitt412, Beyoncephae and Aphlak | Mar 24, 2023 12:53 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Southern California | Christa Bancroft cbancrof@usc.edu |
Analysis of Gusanita (FF), MidnightRain (AY) and Tape Measure protein research | Mar 21, 2023 11:25 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Texas at San Antonio | Jennifer Guerrero jennifer.guerrero@utsa.edu |
Isolation and genome characterization of bacteriophage Morrigan | Apr 13, 2023 6:57 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | University of Wisconsin-River Falls | Karen Klyczek karen.k.klyczek@uwrf.edu |
Isolation and annotation of Damascus, a cluster EL phage isolated on Microbacterium paraoxydans | Mar 21, 2023 11:59 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Virginia Commonwealth University | Allison Johnson aajohnson@vcu.edu |
The Good Fortune of Annotating LittleFortune: Big Functionalities and Big Opportunities for LittleFortune | Mar 19, 2023 12:01 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Virginia Commonwealth University | Allison Johnson aajohnson@vcu.edu |
The discovery and genome annotation of Mycobacteriophage CheetoDust | Mar 19, 2023 12:05 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Virginia State University | Andrea Beyer abeyer@vsu.edu |
A Sea of Phages: A Study of One in 10^31 | Mar 21, 2023 6:34 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Virginia State University | Andrea Beyer abeyer@vsu.edu |
Wybie with the Phages: A characterization of Arthrobacteriophage Wyborn | Mar 21, 2023 6:31 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Virginia Tech | Stephanie Voshell svoshell@vt.edu |
SlimJimmy: A unique addition to the M1 subcluster of Mycobacteriophages | Mar 21, 2023 9:02 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Western Carolina University | Maria Gainey mdgainey@email.wcu.edu |
The Discovery and Genome Annotation of Gordonia Phages Conley and Jamzy, and the Rediscovery of Gordonia Prophage Emperor | Mar 21, 2023 9:28 p.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Winthrop University | Kristi Westover westoverk@winthrop.edu |
From Soil to SEA - Discovery and Characterization of Novel Bacteriophages Ashballer and Bombitas | Mar 13, 2023 11:37 a.m. |
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| Isolation and Genomic Characterization of New Phage(s) | Xavier University of Louisiana | Harris McFerrin hmcferri@xula.edu |
Genomic characterization of Microbacterium bacteriophage Babydotz | Mar 21, 2023 12:05 p.m. |
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| Other | Purdue University | Kari Clase kclase@purdue.edu |
Isolation, Characterization, and Annotation of Mycobacterium smegmatis Bacteriophages SrishMeg2525, MadKillah, Nedwong, PurduePete, AlpineSix, and UptownCabaret | Apr 10, 2023 1:59 p.m. |
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| Troubleshooting and/or New Techniques | LeTourneau University | Fred Baliraine fredbaliraine@letu.edu |
DeepTMHMM Showing a Holin With One Transmembrane Domain: Is One Software Sufficient to Make this Call? | Mar 28, 2023 11:20 p.m. |
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| Troubleshooting and/or New Techniques | Western Carolina University | Maria Gainey mdgainey@email.wcu.edu |
Validation of the 3-Dimensional Structure of Cluster A1 Mycobacteriophage Adahisdi’s Repressor Protein Using Alanine Scanning | Mar 21, 2023 9:37 p.m. |
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| Faculty-Presented Abstracts | |||||
|---|---|---|---|---|---|
| Topic | Institution | Faculty Contact | Title | Last Modified | Files |
| Troubleshooting and/or New Techniques | University of Pittsburgh | Sarah J. Swerdlow sjs308@pitt.edu |
Direct isolation of Gordonia terrae phage from freezing soil and potted plants | Mar 28, 2023 4:26 p.m. |
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| Other | University of South Florida | Richard Pollenz pollenz@usf.edu |
Bioinformatic and wet-lab analysis of holin-like membrane proteins in the lysis cassette of the DR cluster phage CaiB that infects Gordonia rubripertincta | Mar 20, 2023 2:34 p.m. |
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| TA-Presented Abstracts | ||||
|---|---|---|---|---|
| Institution | Faculty Contact | Title | Last Modified | Files |
| Phage Gene Expression Studies | Danielle Heller hellerd@hhmi.org |
Genome-wide overexpression screen reveals that cluster K6 mycobacteriophage Hammy encodes novel and conserved inhibitors of mycobacterial growth | Feb 20, 2024 3:39 p.m. |
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| Other | Michael Kuchka mrk5@lehigh.edu |
Year Two of SEA-GENES Analysis of Mycobacteriophage Taptic Gene Functions at Lehigh University | Mar 15, 2023 2:02 p.m. |
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| Other | Kari Clase kclase@purdue.edu |
Identifying Non-Traditional Slippery Sequences Associated with Translational Frameshifts | Mar 19, 2023 5:36 p.m. |
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| Other | Kari Clase kclase@purdue.edu |
SEA-PHAGES Course-Based Undergraduate Research Experience for Creating a Biotechnology Workforce Development Pipeline | Mar 20, 2023 10:33 a.m. |
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| Other | Kari Clase kclase@purdue.edu |
Identifying Essential Genes for the Assembly and Function of Tails in Novel Myoviridae Bacteriophages | Mar 20, 2023 11:29 p.m. |
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